dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02434
Location and strand information: 108191 - 109423 (+)
Family: 3.A.1.125.1
Protein type: TC
Protein description: Lipoprotein-releasing system transmembrane protein LolE

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02435
Location and strand information: 109860 - 113363 (+)
Family: GH106|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6557
Protein molecular weight: 132090.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02436
Location and strand information: 113444 - 117499 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02437
Location and strand information: 118016 - 121090 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02438
Location and strand information: 121111 - 122835 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02439
Location and strand information: 123028 - 125106 (+)
Family: PL8_3|PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 6.8694
Protein molecular weight: 78924.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02440
Location and strand information: 125155 - 129207 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02441
Location and strand information: 129304 - 129432 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02442
Location and strand information: 129449 - 132124 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7603
Protein molecular weight: 101051.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02443
Location and strand information: 132689 - 135850 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02444
Location and strand information: 135863 - 137551 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02445
Location and strand information: 137585 - 137962 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02446
Location and strand information: 138036 - 139457 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2594
Protein molecular weight: 51795.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02447
Location and strand information: 139594 - 142293 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.6973
Protein molecular weight: 102399.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02448
Location and strand information: 142290 - 144887 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 6.7057
Protein molecular weight: 100284.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02449
Location and strand information: 144910 - 146100 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 7.7057
Protein molecular weight: 45003.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02450
Location and strand information: 146113 - 147576 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7373
Protein molecular weight: 52950.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02451
Location and strand information: 147587 - 152347 (+)
Family: CBM67|GH78|PL8|PL8_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3118
Protein molecular weight: 177991.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02452
Location and strand information: 152463 - 153236 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein YpdB

Gene clsuter ID: MGYG000001780_15|CGC3
Gene ID: MGYG000001780_02453
Location and strand information: 153249 - 154253 (+)
Family: 9.B.33.1.2
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_02434	Lipoprotein-releasing system transmembrane protein LolE	TC	108191	109423	+	3.A.1.125.1
MGYG000001780_02435	hypothetical protein	CAZyme	109860	113363	+	GH106\| GH43
MGYG000001780_02436	Sensor histidine kinase RcsC	TF	113444	117499	-	HTH_AraC
MGYG000001780_02437	TonB-dependent receptor SusC	TC	118016	121090	+	1.B.14.6.1
MGYG000001780_02438	hypothetical protein	TC	121111	122835	+	8.A.46.1.6
MGYG000001780_02439	Chondroitinase-AC	CAZyme	123028	125106	+	PL8_3\| PL8
MGYG000001780_02440	Sensor histidine kinase RcsC	TF	125155	129207	-	HTH_AraC
MGYG000001780_02441	hypothetical protein	null	129304	129432	+	No domain
MGYG000001780_02442	hypothetical protein	CAZyme	129449	132124	+	CBM67\| GH78
MGYG000001780_02443	hypothetical protein	TC	132689	135850	+	1.B.14.6.1
MGYG000001780_02444	SusD-like protein	TC	135863	137551	+	8.A.46.1.3
MGYG000001780_02445	hypothetical protein	null	137585	137962	+	No domain
MGYG000001780_02446	hypothetical protein	CAZyme	138036	139457	+	GH28
MGYG000001780_02447	Exo-beta-D-glucosaminidase	CAZyme	139594	142293	+	GH2
MGYG000001780_02448	Exo-beta-D-glucosaminidase	CAZyme	142290	144887	+	GH2
MGYG000001780_02449	Unsaturated chondroitin disaccharide hydrolase	CAZyme	144910	146100	+	GH88
MGYG000001780_02450	hypothetical protein	CAZyme	146113	147576	+	GH28
MGYG000001780_02451	hypothetical protein	CAZyme	147587	152347	+	CBM67\| GH78\| PL8\| PL8_3
MGYG000001780_02452	Transcriptional regulatory protein YpdB	TF	152463	153236	+	LytTR
MGYG000001780_02453	hypothetical protein	TC	153249	154253	+	9.B.33.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature