dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02925
Location and strand information: 58118 - 59320 (+)
Family: GH76
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.489
Protein molecular weight: 45616.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02926
Location and strand information: 59352 - 60818 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5714
Protein molecular weight: 55600.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02927
Location and strand information: 60833 - 61954 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.5502
Protein molecular weight: 43250.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02928
Location and strand information: 61976 - 63922 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.5177
Protein molecular weight: 74603.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02929
Location and strand information: 63936 - 66086 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.7814
Protein molecular weight: 81910.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02930
Location and strand information: 66098 - 68026 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02931
Location and strand information: 68097 - 71207 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02932
Location and strand information: 71231 - 73045 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02933
Location and strand information: 73722 - 75509 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02934
Location and strand information: 75613 - 79224 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4699
Protein molecular weight: 134481.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02935
Location and strand information: 79450 - 83499 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02936
Location and strand information: 83517 - 86132 (-)
Family: null
Protein type: null
Protein description: DNA mismatch repair protein MutS

Gene clsuter ID: MGYG000001780_20|CGC2
Gene ID: MGYG000001780_02937
Location and strand information: 86601 - 88067 (+)
Family: GH30|GH30_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9417
Protein molecular weight: 56706.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001780_02925	GH76_e1\|3.2.1.101	alpha-mannan
MGYG000001780_02926	GH125_e1\|3.2.1.-	alpha-mannan
MGYG000001780_02927	GH105_e6
MGYG000001780_02928	GH97_e20\|3.2.1.22	alpha-glucan
MGYG000001780_02929	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000001780_02934	GH38_e31\|3.2.1.113\|3.2.1.-	hostglycan\|alpha-mannan
MGYG000001780_02937	GH30_e23

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-mannan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001780_02925	hypothetical protein	CAZyme	58118	59320	+	GH76
MGYG000001780_02926	hypothetical protein	CAZyme	59352	60818	+	GH125
MGYG000001780_02927	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	60833	61954	+	GH105
MGYG000001780_02928	Retaining alpha-galactosidase	CAZyme	61976	63922	+	GH97
MGYG000001780_02929	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	63936	66086	+	GH67
MGYG000001780_02930	hypothetical protein	null	66098	68026	+	No domain
MGYG000001780_02931	TonB-dependent receptor SusC	TC	68097	71207	+	1.B.14.6.1
MGYG000001780_02932	hypothetical protein	TC	71231	73045	+	8.A.46.1.6
MGYG000001780_02933	hypothetical protein	null	73722	75509	+	AAA-ATPase_like\| PDDEXK_9
MGYG000001780_02934	hypothetical protein	CAZyme	75613	79224	-	GH38
MGYG000001780_02935	Sensor histidine kinase RcsC	TF	79450	83499	+	HTH_AraC+HTH_AraC
MGYG000001780_02936	DNA mismatch repair protein MutS	null	83517	86132	-	MutS_I\| MutS_II\| MutS_III\| MutS_IV\| MutS_V
MGYG000001780_02937	hypothetical protein	CAZyme	86601	88067	+	GH30\| GH30_2
Protein ID	Protein Name	Type	Start	End	Strand	Signature