dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02631
Location and strand information: 21216 - 21863 (-)
Family: 2.A.38.4.4
Protein type: TC
Protein description: Ktr system potassium uptake protein A

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02632
Location and strand information: 21883 - 23223 (-)
Family: 2.A.38.4.1
Protein type: TC
Protein description: Potassium/sodium uptake protein NtpJ

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02633
Location and strand information: 23605 - 24318 (+)
Family: LytTR
Protein type: TF
Protein description: Transcriptional regulatory protein BtsR

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02634
Location and strand information: 24383 - 25105 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02635
Location and strand information: 25323 - 27191 (+)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02636
Location and strand information: 27188 - 29062 (+)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02637
Location and strand information: 29289 - 29453 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02638
Location and strand information: 29469 - 30623 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02639
Location and strand information: 30667 - 32166 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0993
Protein molecular weight: 56483.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02640
Location and strand information: 32306 - 33148 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02641
Location and strand information: 33145 - 34254 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02642
Location and strand information: 34251 - 35747 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02643
Location and strand information: 35898 - 36947 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Fructose import binding protein FruE

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02644
Location and strand information: 37128 - 38657 (+)
Family: 3.A.1.2.23
Protein type: TC
Protein description: Fructose import ATP-binding protein FruK

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02645
Location and strand information: 38654 - 39715 (+)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Fructose import permease protein FruF

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02646
Location and strand information: 39717 - 40742 (+)
Family: 3.A.1.2.14
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YjfF

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02647
Location and strand information: 40926 - 42617 (+)
Family: MCPsignal
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02648
Location and strand information: 42630 - 43721 (+)
Family: 3.A.1.2.25
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02649
Location and strand information: 43837 - 44694 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001797_25|CGC1
Gene ID: MGYG000001797_02650
Location and strand information: 44874 - 46802 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.0866
Protein molecular weight: 72706.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001797_02631	Ktr system potassium uptake protein A	TC	21216	21863	-	2.A.38.4.4
MGYG000001797_02632	Potassium/sodium uptake protein NtpJ	TC	21883	23223	-	2.A.38.4.1
MGYG000001797_02633	Transcriptional regulatory protein BtsR	TF	23605	24318	+	LytTR
MGYG000001797_02634	hypothetical protein	null	24383	25105	+	SPOB_a\| HATPase_c_5
MGYG000001797_02635	Vitamin B12 import ATP-binding protein BtuD	TC	25323	27191	+	3.A.1.111.2
MGYG000001797_02636	Vitamin B12 import ATP-binding protein BtuD	TC	27188	29062	+	3.A.1.111.2
MGYG000001797_02637	hypothetical protein	null	29289	29453	+	No domain
MGYG000001797_02638	Arabinose metabolism transcriptional repressor	TF	29469	30623	+	GntR
MGYG000001797_02639	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	30667	32166	-	GH51
MGYG000001797_02640	HTH-type transcriptional activator RhaR	TF	32306	33148	+	HTH_AraC
MGYG000001797_02641	HTH-type transcriptional activator RhaR	TF	33145	34254	+	HTH_AraC+HTH_AraC
MGYG000001797_02642	hypothetical protein	TC	34251	35747	+	9.B.33.1.1
MGYG000001797_02643	Fructose import binding protein FruE	TC	35898	36947	+	3.A.1.2.1
MGYG000001797_02644	Fructose import ATP-binding protein FruK	TC	37128	38657	+	3.A.1.2.23
MGYG000001797_02645	Fructose import permease protein FruF	TC	38654	39715	+	3.A.1.2.14
MGYG000001797_02646	Inner membrane ABC transporter permease protein YjfF	TC	39717	40742	+	3.A.1.2.14
MGYG000001797_02647	hypothetical protein	STP	40926	42617	+	MCPsignal
MGYG000001797_02648	hypothetical protein	TC	42630	43721	+	3.A.1.2.25
MGYG000001797_02649	HTH-type transcriptional activator RhaS	TF	43837	44694	+	HTH_AraC
MGYG000001797_02650	Non-reducing end beta-L-arabinofuranosidase	CAZyme	44874	46802	+	GH127
Protein ID	Protein Name	Type	Start	End	Strand	Signature