dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00976
Location and strand information: 18436 - 19698 (-)
Family: GH88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4968
Protein molecular weight: 47978.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00977
Location and strand information: 19905 - 21641 (-)
Family: GH43|GH43_11
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.9832
Protein molecular weight: 65781.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00978
Location and strand information: 21884 - 22681 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00979
Location and strand information: 22726 - 24294 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00980
Location and strand information: 24269 - 26164 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00981
Location and strand information: 26274 - 27113 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00982
Location and strand information: 27113 - 28003 (-)
Family: 3.A.1.1.28
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00983
Location and strand information: 28090 - 29529 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00984
Location and strand information: 29834 - 31165 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8781
Protein molecular weight: 49370.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00985
Location and strand information: 31366 - 33141 (-)
Family: 3.A.1.111.4
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000001809_12|CGC1
Gene ID: MGYG000001809_00986
Location and strand information: 33144 - 34253 (-)
Family: 3.A.1.111.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001809_00976	hypothetical protein	CAZyme	18436	19698	-	GH88
MGYG000001809_00977	Beta-xylosidase	CAZyme	19905	21641	-	GH43\| GH43_11
MGYG000001809_00978	Arabinose operon regulatory protein	TF	21884	22681	+	HTH_AraC+HTH_AraC
MGYG000001809_00979	Chemotaxis response regulator protein-glutamate methylesterase	TF	22726	24294	-	HTH_AraC+HTH_AraC
MGYG000001809_00980	hypothetical protein	TC	24269	26164	-	8.A.59.2.1
MGYG000001809_00981	L-arabinose transport system permease protein AraQ	TC	26274	27113	-	3.A.1.1.45
MGYG000001809_00982	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	27113	28003	-	3.A.1.1.28
MGYG000001809_00983	hypothetical protein	STP	28090	29529	-	SBP_bac_1
MGYG000001809_00984	hypothetical protein	CAZyme	29834	31165	+	GH28
MGYG000001809_00985	Vitamin B12 import ATP-binding protein BtuD	TC	31366	33141	-	3.A.1.111.4
MGYG000001809_00986	Vitamin B12 import ATP-binding protein BtuD	TC	33144	34253	-	3.A.1.111.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature