dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01553
Location and strand information: 20023 - 21057 (-)
Family: GH0|GH159
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3984
Protein molecular weight: 39581.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01554
Location and strand information: 21188 - 22120 (-)
Family: null
Protein type: null
Protein description: Small ribosomal subunit biogenesis GTPase RsgA

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01555
Location and strand information: 22120 - 22683 (-)
Family: null
Protein type: null
Protein description: Ribosome-recycling factor

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01556
Location and strand information: 22931 - 24106 (-)
Family: 2.A.1.7.17
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01557
Location and strand information: 24132 - 24842 (-)
Family: null
Protein type: null
Protein description: Uridylate kinase

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01558
Location and strand information: 25125 - 27785 (-)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9217
Protein molecular weight: 100034.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01559
Location and strand information: 27788 - 30445 (-)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9495
Protein molecular weight: 101332.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01560
Location and strand information: 30503 - 33640 (-)
Family: GH0|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0014
Protein molecular weight: 119536.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01561
Location and strand information: 33777 - 35318 (-)
Family: 8.A.46.1.4
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01562
Location and strand information: 35331 - 38315 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001878_26|CGC1
Gene ID: MGYG000001878_01563
Location and strand information: 38653 - 41484 (-)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1894
Protein molecular weight: 107243.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001878_01553	hypothetical protein	CAZyme	20023	21057	-	GH0\| GH159
MGYG000001878_01554	Small ribosomal subunit biogenesis GTPase RsgA	null	21188	22120	-	RsgA_N\| RsgA_GTPase
MGYG000001878_01555	Ribosome-recycling factor	null	22120	22683	-	RRF
MGYG000001878_01556	hypothetical protein	TC	22931	24106	-	2.A.1.7.17
MGYG000001878_01557	Uridylate kinase	null	24132	24842	-	AA_kinase
MGYG000001878_01558	hypothetical protein	CAZyme	25125	27785	-	GH78\| CBM67
MGYG000001878_01559	hypothetical protein	CAZyme	27788	30445	-	GH78\| CBM67
MGYG000001878_01560	hypothetical protein	CAZyme	30503	33640	-	GH0\| GH106
MGYG000001878_01561	SusD-like protein	TC	33777	35318	-	8.A.46.1.4
MGYG000001878_01562	TonB-dependent receptor SusC	TC	35331	38315	-	1.B.14.6.1
MGYG000001878_01563	hypothetical protein	CAZyme	38653	41484	-	GH78\| CBM67
Protein ID	Protein Name	Type	Start	End	Strand	Signature