dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02239
Location and strand information: 14822 - 17176 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1854
Protein molecular weight: 87252.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02240
Location and strand information: 17191 - 18342 (+)
Family: 2.A.1.7.16
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02241
Location and strand information: 18477 - 20012 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02242
Location and strand information: 20025 - 21062 (-)
Family: 8.A.1.1.2
Protein type: TC
Protein description: Multidrug export protein EmrA

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02243
Location and strand information: 21115 - 22446 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02244
Location and strand information: 22623 - 23417 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02245
Location and strand information: 23433 - 24215 (-)
Family: 3.A.1.27.5
Protein type: TC
Protein description: putative ribonucleotide transport ATP-binding protein mkl

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02246
Location and strand information: 24218 - 24943 (-)
Family: 3.A.1.27.1
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000001878_50|CGC1
Gene ID: MGYG000001878_02247
Location and strand information: 25074 - 25835 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is host glycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001878_02239	hypothetical protein	CAZyme	14822	17176	+	GH92
MGYG000001878_02240	hypothetical protein	TC	17191	18342	+	2.A.1.7.16
MGYG000001878_02241	hypothetical protein	null	18477	20012	-	No domain
MGYG000001878_02242	Multidrug export protein EmrA	TC	20025	21062	-	8.A.1.1.2
MGYG000001878_02243	hypothetical protein	null	21115	22446	-	OEP\| OEP
MGYG000001878_02244	HTH-type transcriptional activator RhaS	TF	22623	23417	+	HTH_AraC+HTH_AraC
MGYG000001878_02245	putative ribonucleotide transport ATP-binding protein mkl	TC	23433	24215	-	3.A.1.27.5
MGYG000001878_02246	putative phospholipid ABC transporter permease protein MlaE	TC	24218	24943	-	3.A.1.27.1
MGYG000001878_02247	Lipopolysaccharide export system ATP-binding protein LptB	TC	25074	25835	+	1.B.42.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature