logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001963_18|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001963_01069
Sec-independent protein translocase protein TatC
TC 13889 14710 + 2.A.64.3.2
MGYG000001963_01070
Sensor histidine kinase RcsC
TF 14715 18773 + HTH_AraC
MGYG000001963_01071
hypothetical protein
null 19008 19127 - No domain
MGYG000001963_01072
Heparin-sulfate lyase
CAZyme 19280 21484 + PL12| PL12_2
MGYG000001963_01073
hypothetical protein
null 21510 23780 + DUF4958
MGYG000001963_01074
TonB-dependent receptor SusC
TC 23809 26841 + 1.B.14.6.1
MGYG000001963_01075
hypothetical protein
TC 26982 28700 + 8.A.46.1.3
MGYG000001963_01076
Unsaturated chondroitin disaccharide hydrolase
CAZyme 28948 30222 + GH88
MGYG000001963_01077
Heparin-sulfate lyase
CAZyme 30236 32233 + PL12| PL12_2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001963_01072 PL12_e10|4.2.2.8 hostglycan
MGYG000001963_01076 GH88_e23|3.2.1.- hostglycan
MGYG000001963_01077 PL12_e10|4.2.2.8 hostglycan

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig


Genomic location