dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00710
Location and strand information: 3507 - 4202 (-)
Family: 9.B.14.2.5
Protein type: TC
Protein description: Heme exporter protein C

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00711
Location and strand information: 4206 - 4910 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00712
Location and strand information: 4904 - 5617 (-)
Family: 3.A.1.11.3
Protein type: TC
Protein description: Aliphatic sulfonates import ATP-binding protein SsuB

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00713
Location and strand information: 5621 - 7588 (-)
Family: 9.B.14.1.7
Protein type: TC
Protein description: Cytochrome c-type biogenesis protein CcmF

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00714
Location and strand information: 7765 - 8181 (-)
Family: null
Protein type: null
Protein description: Cytochrome c-type biogenesis protein CcmE

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00715
Location and strand information: 8384 - 9439 (-)
Family: 9.A.40.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00716
Location and strand information: 10162 - 11055 (+)
Family: null
Protein type: null
Protein description: Tyrosine recombinase XerC

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00717
Location and strand information: 11055 - 12119 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 8.0813
Protein molecular weight: 41105.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00718
Location and strand information: 12175 - 13137 (+)
Family: null
Protein type: null
Protein description: UDP-glucose 4-epimerase

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00719
Location and strand information: 13139 - 14434 (+)
Family: null
Protein type: null
Protein description: UDP-glucose 6-dehydrogenase

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00720
Location and strand information: 14532 - 15410 (+)
Family: 4.D.1.1.3
Protein type: TC
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00721
Location and strand information: 15475 - 17874 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00722
Location and strand information: 17940 - 18104 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002134_8|CGC1
Gene ID: MGYG000002134_00723
Location and strand information: 18265 - 20691 (+)
Family: 3.A.11.3.1
Protein type: TC
Protein description: Primosomal protein N'

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002134_00710	Heme exporter protein C	TC	3507	4202	-	9.B.14.2.5
MGYG000002134_00711	hypothetical protein	null	4206	4910	-	CcmB
MGYG000002134_00712	Aliphatic sulfonates import ATP-binding protein SsuB	TC	4904	5617	-	3.A.1.11.3
MGYG000002134_00713	Cytochrome c-type biogenesis protein CcmF	TC	5621	7588	-	9.B.14.1.7
MGYG000002134_00714	Cytochrome c-type biogenesis protein CcmE	null	7765	8181	-	CcmE
MGYG000002134_00715	hypothetical protein	TC	8384	9439	-	9.A.40.2.2
MGYG000002134_00716	Tyrosine recombinase XerC	null	10162	11055	+	Phage_integrase
MGYG000002134_00717	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	11055	12119	+	GT2
MGYG000002134_00718	UDP-glucose 4-epimerase	null	12175	13137	+	GDP_Man_Dehyd
MGYG000002134_00719	UDP-glucose 6-dehydrogenase	null	13139	14434	+	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000002134_00720	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	TC	14532	15410	+	4.D.1.1.3
MGYG000002134_00721	hypothetical protein	null	15475	17874	+	Methyltransf_24\| Glyco_transf_8
MGYG000002134_00722	hypothetical protein	null	17940	18104	+	Epimerase
MGYG000002134_00723	Primosomal protein N'	TC	18265	20691	+	3.A.11.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature