dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01170
Location and strand information: 28495 - 29970 (-)
Family: 2.A.1.14.1
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01171
Location and strand information: 30200 - 31156 (-)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01172
Location and strand information: 31197 - 32594 (-)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01173
Location and strand information: 32884 - 34116 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 6.8509
Protein molecular weight: 47212.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01174
Location and strand information: 34121 - 35068 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.1406
Protein molecular weight: 35922.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01175
Location and strand information: 35199 - 38414 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01176
Location and strand information: 38436 - 40211 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01177
Location and strand information: 40241 - 41830 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002171_22|CGC1
Gene ID: MGYG000002171_01178
Location and strand information: 41942 - 43468 (+)
Family: CE8|PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.2142
Protein molecular weight: 54580.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002171_01173	GH105_e8\|3.2.1.-	pectin
MGYG000002171_01174	CE8_e34
MGYG000002171_01178	PL1_e44\|CE8_e45\|4.2.2.2	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002171_01170	Hexuronate transporter	TC	28495	29970	-	2.A.1.14.1
MGYG000002171_01171	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	30200	31156	-	KduI
MGYG000002171_01172	PTS system galactitol-specific EIIC component	TC	31197	32594	-	4.A.5.1.4
MGYG000002171_01173	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	32884	34116	+	GH105
MGYG000002171_01174	Pectinesterase A	CAZyme	34121	35068	+	CE8
MGYG000002171_01175	TonB-dependent receptor SusC	TC	35199	38414	+	1.B.14.6.1
MGYG000002171_01176	hypothetical protein	null	38436	40211	+	SusD-like_3\| SusD_RagB
MGYG000002171_01177	hypothetical protein	null	40241	41830	+	fn3\| DUF4957\| DUF5123
MGYG000002171_01178	hypothetical protein	CAZyme	41942	43468	+	CE8\| PL1_2\| PL1
Protein ID	Protein Name	Type	Start	End	Strand	Signature