dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00243
Location and strand information: 97 - 612 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00244
Location and strand information: 667 - 1722 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00245
Location and strand information: 1890 - 2471 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00246
Location and strand information: 2473 - 3867 (+)
Family: 2.A.50.2.1
Protein type: TC
Protein description: Peptidoglycan O-acetyltransferase

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00247
Location and strand information: 3904 - 5001 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00248
Location and strand information: 5110 - 8229 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7323
Protein molecular weight: 120500.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00249
Location and strand information: 8386 - 10134 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00250
Location and strand information: 10106 - 11623 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00251
Location and strand information: 11952 - 13433 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00252
Location and strand information: 13567 - 14538 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002186_3|CGC1
Gene ID: MGYG000002186_00253
Location and strand information: 14556 - 15476 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002186_00243	L-arabinose transport system permease protein AraQ	TC	97	612	+	3.A.1.1.34
MGYG000002186_00244	HTH-type transcriptional regulator LacR	TF	667	1722	-	LacI
MGYG000002186_00245	hypothetical protein	null	1890	2471	+	No domain
MGYG000002186_00246	Peptidoglycan O-acetyltransferase	TC	2473	3867	+	2.A.50.2.1
MGYG000002186_00247	hypothetical protein	null	3904	5001	+	DHHW
MGYG000002186_00248	hypothetical protein	CAZyme	5110	8229	+	GH38
MGYG000002186_00249	hypothetical protein	TC	8386	10134	+	8.A.59.2.1
MGYG000002186_00250	Regulator of RpoS	TF	10106	11623	+	HTH_AraC+HTH_AraC
MGYG000002186_00251	hypothetical protein	STP	11952	13433	+	SBP_bac_1
MGYG000002186_00252	putative multiple-sugar transport system permease YteP	TC	13567	14538	+	3.A.1.1.29
MGYG000002186_00253	L-arabinose transport system permease protein AraQ	TC	14556	15476	+	3.A.1.1.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature