dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00652
Location and strand information: 34015 - 35094 (+)
Family: 2.A.6.3.11
Protein type: TC
Protein description: Efflux pump periplasmic linker BepF

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00653
Location and strand information: 35099 - 38239 (+)
Family: 2.A.6.3.6
Protein type: TC
Protein description: Swarming motility protein SwrC

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00654
Location and strand information: 38242 - 38592 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00655
Location and strand information: 38794 - 39462 (-)
Family: 9.B.18.1.2
Protein type: TC
Protein description: putative sugar transferase EpsL

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00656
Location and strand information: 39469 - 40467 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 4.9672
Protein molecular weight: 37635.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00657
Location and strand information: 40464 - 41312 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5246
Protein molecular weight: 32998.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00658
Location and strand information: 41339 - 42520 (-)
Family: GT4
Protein type: CAZyme
Protein description: D-inositol-3-phosphate glycosyltransferase
Protein isoelectric point: 8.9735
Protein molecular weight: 44346.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00659
Location and strand information: 42514 - 43584 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002205_11|CGC1
Gene ID: MGYG000002205_00660
Location and strand information: 43581 - 44591 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 6.8161
Protein molecular weight: 39258.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002205_00652	Efflux pump periplasmic linker BepF	TC	34015	35094	+	2.A.6.3.11
MGYG000002205_00653	Swarming motility protein SwrC	TC	35099	38239	+	2.A.6.3.6
MGYG000002205_00654	hypothetical protein	null	38242	38592	+	No domain
MGYG000002205_00655	putative sugar transferase EpsL	TC	38794	39462	-	9.B.18.1.2
MGYG000002205_00656	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	39469	40467	-	GT2
MGYG000002205_00657	hypothetical protein	CAZyme	40464	41312	-	GT2
MGYG000002205_00658	D-inositol-3-phosphate glycosyltransferase	CAZyme	41339	42520	-	GT4
MGYG000002205_00659	hypothetical protein	null	42514	43584	-	EpsG
MGYG000002205_00660	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	43581	44591	-	GT2
Protein ID	Protein Name	Type	Start	End	Strand	Signature