logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002209_22|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002209_01368
Extracellular xylan exo-alpha-(1->2)-glucuronosidase
CAZyme 2079 4202 - GH67
MGYG000002209_01369
Xylosidase/arabinosidase
CAZyme 4301 5272 - GH43| GH43_1
MGYG000002209_01370
Endo-1,4-beta-xylanase A
CAZyme 5513 6649 - GH10
MGYG000002209_01371
Glucuronide carrier protein
TC 6987 8408 - 2.A.2.3.2
MGYG000002209_01372
hypothetical protein
null 8839 10521 - SASA| Glyco_hydro_2_N| SASA
MGYG000002209_01373
hypothetical protein
CAZyme 10554 12260 - GH35
MGYG000002209_01374
hypothetical protein
CAZyme 12562 14922 - CBM22| GH10
MGYG000002209_01375
hypothetical protein
null 14950 16311 - SGBP_B_XBD
MGYG000002209_01376
SusD-like protein
null 16361 18103 - SusD-like_3| SusD_RagB
MGYG000002209_01377
TonB-dependent receptor SusC
TC 18123 21266 - 1.B.14.6.1
MGYG000002209_01378
Sensor histidine kinase RcsC
TF 21796 25917 + HTH_AraC+HTH_AraC
MGYG000002209_01379
hypothetical protein
CAZyme 26002 28011 + GH43_12| GH43
MGYG000002209_01380
Alkaline phosphatase 4
null 28367 29773 + Alk_phosphatase
MGYG000002209_01381
hypothetical protein
null 29948 30859 - HHH_3| HHH_3| HHH_3
MGYG000002209_01382
hypothetical protein
TC 30869 32233 - 2.A.22.5.3
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is xylan

Protein ID eCAMI subfam CAZyme substrate
MGYG000002209_01368 GH67_e0|3.2.1.139|3.2.1.131|3.2.1.- xylan
MGYG000002209_01369 GH43_e85|3.2.1.55|3.2.1.37 xylan
MGYG000002209_01370 GH10_e55|3.2.1.8|3.2.1.55 xylan
MGYG000002209_01373 GH35_e24
MGYG000002209_01374
MGYG000002209_01379 GH43_e124

Substrate predicted by dbCAN-PUL is xylan download this fig


Genomic location