dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01870
Location and strand information: 34431 - 35042 (+)
Family: 2.A.88.5.2
Protein type: TC
Protein description: Niacin transporter NiaX

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01871
Location and strand information: 35210 - 35917 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01872
Location and strand information: 36182 - 37354 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 4.8339
Protein molecular weight: 43083.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01873
Location and strand information: 37473 - 38702 (+)
Family: 2.A.1.21.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01874
Location and strand information: 38801 - 41017 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01875
Location and strand information: 42510 - 43187 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01876
Location and strand information: 43460 - 45217 (-)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000002270_16|CGC1
Gene ID: MGYG000002270_01877
Location and strand information: 45214 - 46938 (-)
Family: 3.A.1.135.5
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002270_01870	Niacin transporter NiaX	TC	34431	35042	+	2.A.88.5.2
MGYG000002270_01871	hypothetical protein	TF	35210	35917	+	Trans_reg_C
MGYG000002270_01872	Beta-hexosaminidase	CAZyme	36182	37354	+	GH3
MGYG000002270_01873	hypothetical protein	TC	37473	38702	+	2.A.1.21.1
MGYG000002270_01874	hypothetical protein	null	38801	41017	-	MucBP\| Big_3\| MucBP\| Gram_pos_anchor
MGYG000002270_01875	hypothetical protein	null	42510	43187	+	DUF3862
MGYG000002270_01876	putative ABC transporter ATP-binding protein	TC	43460	45217	-	3.A.1.135.5
MGYG000002270_01877	putative ABC transporter ATP-binding protein	TC	45214	46938	-	3.A.1.135.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature