dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03551
Location and strand information: 8139 - 10658 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 4.6419
Protein molecular weight: 93150.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03552
Location and strand information: 10843 - 12189 (-)
Family: CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2805
Protein molecular weight: 49533.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03553
Location and strand information: 12214 - 13242 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03554
Location and strand information: 13446 - 14228 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03555
Location and strand information: 14243 - 17419 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03556
Location and strand information: 17586 - 20018 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.1951
Protein molecular weight: 91625.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03557
Location and strand information: 20166 - 21653 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03558
Location and strand information: 21644 - 22969 (-)
Family: CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9653
Protein molecular weight: 49608.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03559
Location and strand information: 23130 - 27059 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002273_27|CGC1
Gene ID: MGYG000002273_03560
Location and strand information: 27117 - 28235 (-)
Family: 3.A.11.1.3
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002273_03551	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	8139	10658	-	GH51
MGYG000002273_03552	hypothetical protein	CAZyme	10843	12189	-	CBM32
MGYG000002273_03553	hypothetical protein	null	12214	13242	-	SusD_RagB
MGYG000002273_03554	hypothetical protein	null	13446	14228	-	SusD-like_3
MGYG000002273_03555	hypothetical protein	TC	14243	17419	-	1.B.14.6.1
MGYG000002273_03556	Beta-galactosidase BoGH2A	CAZyme	17586	20018	-	GH2
MGYG000002273_03557	hypothetical protein	null	20166	21653	-	RicinB_lectin_2\| Laminin_G_3\| Por_Secre_tail
MGYG000002273_03558	hypothetical protein	CAZyme	21644	22969	-	CBM13
MGYG000002273_03559	Sensor histidine kinase RcsC	TF	23130	27059	-	HTH_AraC
MGYG000002273_03560	hypothetical protein	TC	27117	28235	-	3.A.11.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature