dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01696
Location and strand information: 20717 - 22195 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1133
Protein molecular weight: 54768.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01697
Location and strand information: 22681 - 25269 (-)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 5.3779
Protein molecular weight: 95763.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01698
Location and strand information: 25397 - 27421 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01699
Location and strand information: 27444 - 29054 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01700
Location and strand information: 29108 - 29851 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01701
Location and strand information: 29838 - 30764 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01702
Location and strand information: 31001 - 33319 (+)
Family: Reg_prop+Reg_prop
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01703
Location and strand information: 33316 - 35358 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01704
Location and strand information: 35352 - 37037 (-)
Family: CBM6|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0492
Protein molecular weight: 64195.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01705
Location and strand information: 37094 - 37369 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002273_9|CGC1
Gene ID: MGYG000002273_01706
Location and strand information: 37545 - 39395 (-)
Family: 4.C.1.1.14
Protein type: TC
Protein description: Long-chain-fatty-acid--CoA ligase FadD15

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002273_01696	hypothetical protein	CAZyme	20717	22195	+	GH28
MGYG000002273_01697	Xylan 1,4-beta-xylosidase	CAZyme	22681	25269	-	GH3
MGYG000002273_01698	hypothetical protein	null	25397	27421	-	SusD-like_3\| SusD_RagB
MGYG000002273_01699	TonB-dependent receptor SusC	TC	27444	29054	-	1.B.14.6.1
MGYG000002273_01700	hypothetical protein	null	29108	29851	-	No domain
MGYG000002273_01701	TonB-dependent receptor SusC	TC	29838	30764	-	1.B.14.6.1
MGYG000002273_01702	hypothetical protein	STP	31001	33319	+	Reg_prop\| Reg_prop
MGYG000002273_01703	Sensor histidine kinase RcsC	TF	33316	35358	+	HTH_AraC
MGYG000002273_01704	hypothetical protein	CAZyme	35352	37037	-	CBM6\| GH43_10
MGYG000002273_01705	hypothetical protein	null	37094	37369	-	Glyco_hydro_43
MGYG000002273_01706	Long-chain-fatty-acid--CoA ligase FadD15	TC	37545	39395	-	4.C.1.1.14
Protein ID	Protein Name	Type	Start	End	Strand	Signature