dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02872
Location and strand information: 24004 - 24687 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 7.0522
Protein molecular weight: 26017.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02873
Location and strand information: 24689 - 25525 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02874
Location and strand information: 25536 - 27290 (+)
Family: 3.A.1.117.3
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02875
Location and strand information: 27564 - 27905 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02876
Location and strand information: 27973 - 30144 (-)
Family: GT51
Protein type: CAZyme
Protein description: Penicillin-binding protein 1F
Protein isoelectric point: 5.2484
Protein molecular weight: 79360.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02877
Location and strand information: 30355 - 31212 (+)
Family: null
Protein type: null
Protein description: Ribosomal large subunit pseudouridine synthase D

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02878
Location and strand information: 31279 - 32136 (-)
Family: null
Protein type: null
Protein description: Putative fructokinase

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02879
Location and strand information: 32137 - 34830 (-)
Family: GH38
Protein type: CAZyme
Protein description: Mannosylglycerate hydrolase
Protein isoelectric point: 5.1347
Protein molecular weight: 103572.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02880
Location and strand information: 34843 - 36132 (-)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8936
Protein molecular weight: 49268.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02881
Location and strand information: 36282 - 37328 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02882
Location and strand information: 37330 - 39483 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9352
Protein molecular weight: 82758.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02883
Location and strand information: 39624 - 41069 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02884
Location and strand information: 41072 - 42796 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02885
Location and strand information: 42789 - 43403 (-)
Family: 9.B.28.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02886
Location and strand information: 43658 - 45118 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02887
Location and strand information: 45153 - 46073 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02888
Location and strand information: 46085 - 47032 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02889
Location and strand information: 47511 - 48230 (-)
Family: null
Protein type: null
Protein description: Ribosomal large subunit pseudouridine synthase B

Gene clsuter ID: MGYG000002320_20|CGC2
Gene ID: MGYG000002320_02890
Location and strand information: 48279 - 49925 (-)
Family: 2.A.66.2.14
Protein type: TC
Protein description: Lipid II flippase MurJ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002320_02872	Rhamnogalacturonan acetylesterase RhgT	CAZyme	24004	24687	+	CE12
MGYG000002320_02873	hypothetical protein	null	24689	25525	+	AP_endonuc_2
MGYG000002320_02874	Putative multidrug export ATP-binding/permease protein	TC	25536	27290	+	3.A.1.117.3
MGYG000002320_02875	hypothetical protein	null	27564	27905	-	Com_YlbF
MGYG000002320_02876	Penicillin-binding protein 1F	CAZyme	27973	30144	-	GT51
MGYG000002320_02877	Ribosomal large subunit pseudouridine synthase D	null	30355	31212	+	PseudoU_synth_2
MGYG000002320_02878	Putative fructokinase	null	31279	32136	-	ROK
MGYG000002320_02879	Mannosylglycerate hydrolase	CAZyme	32137	34830	-	GH38
MGYG000002320_02880	hypothetical protein	CAZyme	34843	36132	-	GH125
MGYG000002320_02881	Arabinose metabolism transcriptional repressor	TF	36282	37328	+	GntR
MGYG000002320_02882	hypothetical protein	CAZyme	37330	39483	+	GH92
MGYG000002320_02883	HTH-type transcriptional activator RhaR	TF	39624	41069	-	HTH_AraC+HTH_AraC
MGYG000002320_02884	hypothetical protein	TC	41072	42796	-	8.A.59.2.1
MGYG000002320_02885	hypothetical protein	TC	42789	43403	-	9.B.28.1.11
MGYG000002320_02886	hypothetical protein	STP	43658	45118	-	SBP_bac_1
MGYG000002320_02887	L-arabinose transport system permease protein AraQ	TC	45153	46073	-	3.A.1.1.29
MGYG000002320_02888	putative multiple-sugar transport system permease YteP	TC	46085	47032	-	3.A.1.1.10
MGYG000002320_02889	Ribosomal large subunit pseudouridine synthase B	null	47511	48230	-	S4\| PseudoU_synth_2
MGYG000002320_02890	Lipid II flippase MurJ	TC	48279	49925	-	2.A.66.2.14
Protein ID	Protein Name	Type	Start	End	Strand	Signature