dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02497
Location and strand information: 2549522 - 2550205 (+)
Family: CE12
Protein type: CAZyme
Protein description: Rhamnogalacturonan acetylesterase RhgT
Protein isoelectric point: 7.926
Protein molecular weight: 25941.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02498
Location and strand information: 2550207 - 2551043 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02499
Location and strand information: 2551054 - 2552808 (+)
Family: 3.A.1.117.3
Protein type: TC
Protein description: Putative multidrug export ATP-binding/permease protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02500
Location and strand information: 2553084 - 2553425 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02501
Location and strand information: 2553493 - 2555664 (-)
Family: GT51
Protein type: CAZyme
Protein description: Penicillin-binding protein 1F
Protein isoelectric point: 5.1728
Protein molecular weight: 79437.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02502
Location and strand information: 2555875 - 2556732 (+)
Family: null
Protein type: null
Protein description: Ribosomal large subunit pseudouridine synthase D

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02503
Location and strand information: 2556803 - 2557660 (-)
Family: null
Protein type: null
Protein description: Putative fructokinase

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02504
Location and strand information: 2557645 - 2560347 (-)
Family: GH38
Protein type: CAZyme
Protein description: Mannosylglycerate hydrolase
Protein isoelectric point: 4.9674
Protein molecular weight: 103609.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02505
Location and strand information: 2560360 - 2561649 (-)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7358
Protein molecular weight: 49340.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02506
Location and strand information: 2561799 - 2562845 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02507
Location and strand information: 2562847 - 2565000 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3643
Protein molecular weight: 82683.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02508
Location and strand information: 2565473 - 2566918 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02509
Location and strand information: 2566921 - 2568645 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02510
Location and strand information: 2568638 - 2569252 (-)
Family: 9.B.28.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02511
Location and strand information: 2569597 - 2571054 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02512
Location and strand information: 2571095 - 2572015 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002353_1|CGC36
Gene ID: MGYG000002353_02513
Location and strand information: 2572027 - 2572974 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002353_02497	Rhamnogalacturonan acetylesterase RhgT	CAZyme	2549522	2550205	+	CE12
MGYG000002353_02498	hypothetical protein	null	2550207	2551043	+	AP_endonuc_2
MGYG000002353_02499	Putative multidrug export ATP-binding/permease protein	TC	2551054	2552808	+	3.A.1.117.3
MGYG000002353_02500	hypothetical protein	null	2553084	2553425	-	Com_YlbF
MGYG000002353_02501	Penicillin-binding protein 1F	CAZyme	2553493	2555664	-	GT51
MGYG000002353_02502	Ribosomal large subunit pseudouridine synthase D	null	2555875	2556732	+	PseudoU_synth_2
MGYG000002353_02503	Putative fructokinase	null	2556803	2557660	-	ROK
MGYG000002353_02504	Mannosylglycerate hydrolase	CAZyme	2557645	2560347	-	GH38
MGYG000002353_02505	hypothetical protein	CAZyme	2560360	2561649	-	GH125
MGYG000002353_02506	Arabinose metabolism transcriptional repressor	TF	2561799	2562845	+	GntR
MGYG000002353_02507	hypothetical protein	CAZyme	2562847	2565000	+	GH92
MGYG000002353_02508	HTH-type transcriptional activator RhaR	TF	2565473	2566918	-	HTH_AraC+HTH_AraC
MGYG000002353_02509	hypothetical protein	TC	2566921	2568645	-	8.A.59.2.1
MGYG000002353_02510	hypothetical protein	TC	2568638	2569252	-	9.B.28.1.11
MGYG000002353_02511	hypothetical protein	STP	2569597	2571054	-	SBP_bac_1
MGYG000002353_02512	L-arabinose transport system permease protein AraQ	TC	2571095	2572015	-	3.A.1.1.29
MGYG000002353_02513	putative multiple-sugar transport system permease YteP	TC	2572027	2572974	-	3.A.1.1.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature