dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00552
Location and strand information: 60567 - 61856 (+)
Family: 1.A.34.1.2
Protein type: TC
Protein description: Murein hydrolase activator EnvC

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00553
Location and strand information: 61859 - 62845 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00554
Location and strand information: 63111 - 64043 (+)
Family: null
Protein type: null
Protein description: ADP-L-glycero-D-manno-heptose-6-epimerase

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00555
Location and strand information: 64105 - 65112 (+)
Family: GT9
Protein type: CAZyme
Protein description: ADP-heptose--LPS heptosyltransferase 2
Protein isoelectric point: 8.0525
Protein molecular weight: 37229.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00556
Location and strand information: 65112 - 66077 (+)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide heptosyltransferase 1
Protein isoelectric point: 9.7444
Protein molecular weight: 36258.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00557
Location and strand information: 66117 - 67592 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00558
Location and strand information: 67830 - 69107 (-)
Family: GT30
Protein type: CAZyme
Protein description: 3-deoxy-D-manno-octulosonic acid transferase
Protein isoelectric point: 9.6294
Protein molecular weight: 47644.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00559
Location and strand information: 69360 - 69851 (+)
Family: null
Protein type: null
Protein description: Phosphopantetheine adenylyltransferase

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00560
Location and strand information: 69858 - 70667 (-)
Family: null
Protein type: null
Protein description: Formamidopyrimidine-DNA glycosylase

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00561
Location and strand information: 70791 - 71795 (+)
Family: GT8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3019
Protein molecular weight: 39213.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00562
Location and strand information: 71877 - 72812 (-)
Family: GT8
Protein type: CAZyme
Protein description: General stress protein A
Protein isoelectric point: 9.0852
Protein molecular weight: 37135.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00563
Location and strand information: 72814 - 73611 (-)
Family: null
Protein type: null
Protein description: Lipopolysaccharide core heptose(I) kinase RfaP

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00564
Location and strand information: 73604 - 74728 (-)
Family: GT4
Protein type: CAZyme
Protein description: Lipopolysaccharide core biosynthesis protein RfaG
Protein isoelectric point: 8.3405
Protein molecular weight: 42983.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00565
Location and strand information: 74770 - 75726 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.5615
Protein molecular weight: 37818.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00566
Location and strand information: 75728 - 76960 (-)
Family: 9.B.67.5.1
Protein type: TC
Protein description: O-antigen ligase

Gene clsuter ID: MGYG000002354_6|CGC1
Gene ID: MGYG000002354_00567
Location and strand information: 76987 - 78042 (-)
Family: GT9
Protein type: CAZyme
Protein description: Lipopolysaccharide core heptosyltransferase RfaQ
Protein isoelectric point: 8.9476
Protein molecular weight: 39883.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002354_00552	Murein hydrolase activator EnvC	TC	60567	61856	+	1.A.34.1.2
MGYG000002354_00553	hypothetical protein	null	61859	62845	+	Polysacc_deac_2
MGYG000002354_00554	ADP-L-glycero-D-manno-heptose-6-epimerase	null	63111	64043	+	Epimerase
MGYG000002354_00555	ADP-heptose--LPS heptosyltransferase 2	CAZyme	64105	65112	+	GT9
MGYG000002354_00556	Lipopolysaccharide heptosyltransferase 1	CAZyme	65112	66077	+	GT9
MGYG000002354_00557	hypothetical protein	null	66117	67592	-	PMT_2
MGYG000002354_00558	3-deoxy-D-manno-octulosonic acid transferase	CAZyme	67830	69107	-	GT30
MGYG000002354_00559	Phosphopantetheine adenylyltransferase	null	69360	69851	+	CTP_transf_like
MGYG000002354_00560	Formamidopyrimidine-DNA glycosylase	null	69858	70667	-	Fapy_DNA_glyco\| H2TH\| zf-FPG_IleRS
MGYG000002354_00561	hypothetical protein	CAZyme	70791	71795	+	GT8
MGYG000002354_00562	General stress protein A	CAZyme	71877	72812	-	GT8
MGYG000002354_00563	Lipopolysaccharide core heptose(I) kinase RfaP	null	72814	73611	-	Kdo
MGYG000002354_00564	Lipopolysaccharide core biosynthesis protein RfaG	CAZyme	73604	74728	-	GT4
MGYG000002354_00565	hypothetical protein	CAZyme	74770	75726	-	GT2
MGYG000002354_00566	O-antigen ligase	TC	75728	76960	-	9.B.67.5.1
MGYG000002354_00567	Lipopolysaccharide core heptosyltransferase RfaQ	CAZyme	76987	78042	-	GT9
Protein ID	Protein Name	Type	Start	End	Strand	Signature