dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05531
Location and strand information: 160991 - 162046 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Twitching mobility protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05532
Location and strand information: 162266 - 163066 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05533
Location and strand information: 163203 - 164525 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 4.9908
Protein molecular weight: 49721.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05534
Location and strand information: 164697 - 164927 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05535
Location and strand information: 165381 - 166292 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05536
Location and strand information: 166356 - 167186 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05537
Location and strand information: 167201 - 168097 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05538
Location and strand information: 168211 - 169563 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05539
Location and strand information: 170274 - 170918 (+)
Family: 9.B.28.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05540
Location and strand information: 171001 - 173196 (-)
Family: GH36
Protein type: CAZyme
Protein description: Bifunctional alpha-galactosidase/sucrose kinase AgaSK
Protein isoelectric point: 4.8942
Protein molecular weight: 83171.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05541
Location and strand information: 173551 - 174909 (+)
Family: Citrate_synt
Protein type: STP
Protein description: 2-methylcitrate synthase 1

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05542
Location and strand information: 174911 - 175372 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05543
Location and strand information: 175465 - 176103 (-)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05544
Location and strand information: 176186 - 176896 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05545
Location and strand information: 176910 - 177668 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05546
Location and strand information: 177671 - 178642 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05547
Location and strand information: 178651 - 179538 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000002403_140|CGC4
Gene ID: MGYG000002403_05548
Location and strand information: 179911 - 181125 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002403_05531	Twitching mobility protein	TC	160991	162046	+	3.A.15.2.1
MGYG000002403_05532	HTH-type transcriptional activator RhaS	TF	162266	163066	-	HTH_AraC+HTH_AraC
MGYG000002403_05533	Alpha-galactosidase	CAZyme	163203	164525	+	GH4
MGYG000002403_05534	hypothetical protein	null	164697	164927	-	No domain
MGYG000002403_05535	Arabinose operon regulatory protein	TF	165381	166292	+	HTH_AraC+HTH_AraC
MGYG000002403_05536	L-arabinose transport system permease protein AraQ	TC	166356	167186	-	3.A.1.1.36
MGYG000002403_05537	Lactose transport system permease protein LacF	TC	167201	168097	-	3.A.1.1.20
MGYG000002403_05538	Cyclodextrin-binding protein	TC	168211	169563	-	3.A.1.1.44
MGYG000002403_05539	hypothetical protein	TC	170274	170918	+	9.B.28.1.3
MGYG000002403_05540	Bifunctional alpha-galactosidase/sucrose kinase AgaSK	CAZyme	171001	173196	-	GH36
MGYG000002403_05541	2-methylcitrate synthase 1	STP	173551	174909	+	Citrate_synt
MGYG000002403_05542	hypothetical protein	TF	174911	175372	+	MarR
MGYG000002403_05543	Cytidylate kinase	TC	175465	176103	-	2.A.115.2.14
MGYG000002403_05544	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	176186	176896	-	3.A.1.4.10
MGYG000002403_05545	Lipopolysaccharide export system ATP-binding protein LptB	TC	176910	177668	-	3.A.1.4.10
MGYG000002403_05546	hypothetical protein	TC	177671	178642	-	3.A.1.4.8
MGYG000002403_05547	High-affinity branched-chain amino acid transport system permease protein LivH	TC	178651	179538	-	3.A.1.4.10
MGYG000002403_05548	hypothetical protein	TC	179911	181125	-	3.A.1.4.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature