logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002403_69|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002403_02355
Vitamin B12 import ATP-binding protein BtuD
TC 26379 27242 - 3.A.1.149.1
MGYG000002403_02356
HTH-type transcriptional repressor YtrA
TF 27259 27633 - GntR
MGYG000002403_02357
hypothetical protein
CAZyme 27928 33717 + CE12| PL11_1| PL11| CBM13| CBM2| CBM35
MGYG000002403_02358
HTH-type transcriptional activator RhaS
TF 33729 34655 - HTH_AraC+HTH_AraC
MGYG000002403_02359
putative multiple-sugar transport system permease YteP
TC 34985 35947 + 3.A.1.1.10
MGYG000002403_02360
hypothetical protein
TC 35962 36879 + 3.A.1.1.10
MGYG000002403_02361
hypothetical protein
null 36941 38659 + No domain
MGYG000002403_02362
Unsaturated rhamnogalacturonyl hydrolase YesR
CAZyme 38736 39785 + GH105
MGYG000002403_02363
hypothetical protein
CAZyme 39754 41592 + CE12
MGYG000002403_02364
D-galactosyl-beta-1->4-L-rhamnose phosphorylase
CAZyme 41609 43765 + GH112
MGYG000002403_02365
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
null 44498 45553 + GcpE
MGYG000002403_02366
DNA polymerase III PolC-type
null 45555 50156 + DNA_pol3_a_NI| PHP| RNase_T| DNA_pol3_alpha| DNA_pol3_alpha| DNA_pol3_finger| HHH_6
MGYG000002403_02367
L-arabinose transport system permease protein AraQ
TC 50370 51227 - 3.A.1.1.34
MGYG000002403_02368
sn-glycerol-3-phosphate transport system permease protein UgpA
TC 51217 52062 - 3.A.1.1.36
MGYG000002403_02369
hypothetical protein
STP 52237 53571 - SBP_bac_1
MGYG000002403_02370
Regulator of RpoS
TF 53694 55217 - HTH_AraC+HTH_AraC
MGYG000002403_02371
hypothetical protein
TC 55314 57107 - 8.A.59.2.1
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location