dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03457
Location and strand information: 151 - 1659 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03458
Location and strand information: 1663 - 2667 (+)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03459
Location and strand information: 2667 - 3926 (+)
Family: 3.A.1.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03460
Location and strand information: 4119 - 5330 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03461
Location and strand information: 5508 - 5819 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03462
Location and strand information: 5979 - 7157 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03463
Location and strand information: 7230 - 8243 (-)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03464
Location and strand information: 8246 - 9247 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03465
Location and strand information: 9269 - 10771 (-)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03466
Location and strand information: 11073 - 12524 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03467
Location and strand information: 12607 - 14157 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03468
Location and strand information: 14154 - 15977 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03469
Location and strand information: 16223 - 18037 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03470
Location and strand information: 18213 - 25238 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6627
Protein molecular weight: 258520.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03471
Location and strand information: 25370 - 31600 (-)
Family: CBM32|GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7533
Protein molecular weight: 227942.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03472
Location and strand information: 31698 - 37211 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9487
Protein molecular weight: 202413.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002403_95|CGC1
Gene ID: MGYG000002403_03473
Location and strand information: 37382 - 44035 (-)
Family: CBM32|GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6734
Protein molecular weight: 243875.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002403_03470	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000002403_03471	GH78_e15\|CBM67_e7\|CBM32_e58\|3.2.1.40	alpha-rhamnoside
MGYG000002403_03472	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000002403_03473

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-rhamnoside

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002403_03457	Ribose import ATP-binding protein RbsA	TC	151	1659	+	3.A.1.2.20
MGYG000002403_03458	Ribose import permease protein RbsC	TC	1663	2667	+	3.A.1.2.9
MGYG000002403_03459	hypothetical protein	TC	2667	3926	+	3.A.1.2.2
MGYG000002403_03460	hypothetical protein	null	4119	5330	+	Peripla_BP_4
MGYG000002403_03461	L-rhamnose mutarotase	null	5508	5819	-	rhaM
MGYG000002403_03462	hypothetical protein	TC	5979	7157	-	3.A.1.2.9
MGYG000002403_03463	Autoinducer 2 import system permease protein LsrD	TC	7230	8243	-	3.A.1.2.1
MGYG000002403_03464	Ribose import permease protein RbsC	TC	8246	9247	-	3.A.1.2.9
MGYG000002403_03465	Ribose import ATP-binding protein RbsA	TC	9269	10771	-	3.A.1.2.20
MGYG000002403_03466	Chemotaxis response regulator protein-glutamate methylesterase	TF	11073	12524	+	HTH_AraC
MGYG000002403_03467	HTH-type transcriptional activator RhaR	TF	12607	14157	+	HTH_AraC+HTH_AraC
MGYG000002403_03468	hypothetical protein	TC	14154	15977	+	8.A.59.2.1
MGYG000002403_03469	hypothetical protein	null	16223	18037	-	NLPC_P60
MGYG000002403_03470	hypothetical protein	CAZyme	18213	25238	-	CBM67\| GH78
MGYG000002403_03471	hypothetical protein	CAZyme	25370	31600	-	CBM32\| GH78\| CBM67
MGYG000002403_03472	hypothetical protein	CAZyme	31698	37211	-	CBM67\| GH78
MGYG000002403_03473	hypothetical protein	CAZyme	37382	44035	-	CBM32\| GH78\| CBM67
Protein ID	Protein Name	Type	Start	End	Strand	Signature