dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02717
Location and strand information: 919334 - 920278 (-)
Family: GT108
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8148
Protein molecular weight: 35681.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02718
Location and strand information: 920435 - 921433 (-)
Family: 2.A.20.1.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02719
Location and strand information: 921460 - 922074 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02720
Location and strand information: 922366 - 923475 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.635
Protein molecular weight: 40456.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02721
Location and strand information: 923873 - 925621 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02722
Location and strand information: 925625 - 927187 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02723
Location and strand information: 927296 - 928651 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02724
Location and strand information: 928992 - 929891 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02725
Location and strand information: 929893 - 930738 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002407_18|CGC12
Gene ID: MGYG000002407_02726
Location and strand information: 930766 - 931800 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YesR
Protein isoelectric point: 4.8188
Protein molecular weight: 38348.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002407_02717	hypothetical protein	CAZyme	919334	920278	-	GT108
MGYG000002407_02718	hypothetical protein	TC	920435	921433	-	2.A.20.1.7
MGYG000002407_02719	hypothetical protein	null	921460	922074	-	PhoU_div
MGYG000002407_02720	hypothetical protein	CAZyme	922366	923475	+	CE12
MGYG000002407_02721	hypothetical protein	TC	923873	925621	+	8.A.59.2.1
MGYG000002407_02722	Chemotaxis response regulator protein-glutamate methylesterase	TF	925625	927187	+	HTH_AraC
MGYG000002407_02723	Putative ABC transporter substrate-binding protein YesO	TC	927296	928651	+	3.A.1.1.11
MGYG000002407_02724	Lactose transport system permease protein LacF	TC	928992	929891	+	3.A.1.1.11
MGYG000002407_02725	L-arabinose transport system permease protein AraQ	TC	929893	930738	+	3.A.1.1.11
MGYG000002407_02726	Unsaturated rhamnogalacturonyl hydrolase YesR	CAZyme	930766	931800	+	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature