dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04447
Location and strand information: 4999588 - 5001393 (-)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8597
Protein molecular weight: 70123.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04448
Location and strand information: 5001420 - 5002580 (-)
Family: CE9
Protein type: CAZyme
Protein description: N-acetylglucosamine-6-phosphate deacetylase
Protein isoelectric point: 4.9866
Protein molecular weight: 41166
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04449
Location and strand information: 5002577 - 5003356 (-)
Family: null
Protein type: null
Protein description: Glucosamine-6-phosphate deaminase

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04450
Location and strand information: 5003403 - 5004965 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04451
Location and strand information: 5005010 - 5005879 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04452
Location and strand information: 5005895 - 5006875 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04453
Location and strand information: 5007139 - 5009427 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04454
Location and strand information: 5009504 - 5011507 (-)
Family: GH50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8078
Protein molecular weight: 76260.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04455
Location and strand information: 5011534 - 5012958 (-)
Family: GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5709
Protein molecular weight: 53778.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04456
Location and strand information: 5013045 - 5014718 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04457
Location and strand information: 5014760 - 5015629 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04458
Location and strand information: 5015672 - 5016628 (-)
Family: 3.A.1.1.9
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04459
Location and strand information: 5016857 - 5018587 (+)
Family: 9.B.33.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04460
Location and strand information: 5018568 - 5019923 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04461
Location and strand information: 5019999 - 5020877 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002414_1|CGC89
Gene ID: MGYG000002414_04462
Location and strand information: 5022100 - 5024289 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 5.7219
Protein molecular weight: 82976.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002414_04447	hypothetical protein	CAZyme	4999588	5001393	-	GH20
MGYG000002414_04448	N-acetylglucosamine-6-phosphate deacetylase	CAZyme	5001420	5002580	-	CE9
MGYG000002414_04449	Glucosamine-6-phosphate deaminase	null	5002577	5003356	-	Glucosamine_iso
MGYG000002414_04450	hypothetical protein	STP	5003403	5004965	-	SBP_bac_1
MGYG000002414_04451	L-arabinose transport system permease protein AraQ	TC	5005010	5005879	-	3.A.1.1.10
MGYG000002414_04452	putative multiple-sugar transport system permease YteP	TC	5005895	5006875	-	3.A.1.1.10
MGYG000002414_04453	HTH-type transcriptional activator RhaR	TF	5007139	5009427	+	HTH_AraC+HTH_AraC
MGYG000002414_04454	hypothetical protein	CAZyme	5009504	5011507	-	GH50
MGYG000002414_04455	hypothetical protein	CAZyme	5011534	5012958	-	GH43_24
MGYG000002414_04456	hypothetical protein	TC	5013045	5014718	-	3.A.1.1.9
MGYG000002414_04457	Inner membrane ABC transporter permease protein YcjP	TC	5014760	5015629	-	3.A.1.1.9
MGYG000002414_04458	putative multiple-sugar transport system permease YteP	TC	5015672	5016628	-	3.A.1.1.9
MGYG000002414_04459	hypothetical protein	TC	5016857	5018587	+	9.B.33.1.2
MGYG000002414_04460	Regulator of RpoS	TF	5018568	5019923	+	HTH_AraC
MGYG000002414_04461	HTH-type transcriptional activator RhaR	TF	5019999	5020877	+	HTH_AraC+HTH_AraC
MGYG000002414_04462	Alpha-galactosidase AgaA	CAZyme	5022100	5024289	-	GH36
Protein ID	Protein Name	Type	Start	End	Strand	Signature