dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00080
Location and strand information: 100211 - 102559 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5018
Protein molecular weight: 86925.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00081
Location and strand information: 102703 - 105153 (-)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 6.0381
Protein molecular weight: 90962.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00082
Location and strand information: 105270 - 105632 (+)
Family: Response_reg
Protein type: STP
Protein description: Transcriptional regulatory protein SrrA

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00083
Location and strand information: 105728 - 106846 (+)
Family: Response_reg+HisKA+HATPase_c
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00084
Location and strand information: 106921 - 107679 (-)
Family: GT2
Protein type: CAZyme
Protein description: Polyprenol monophosphomannose synthase
Protein isoelectric point: 8.3065
Protein molecular weight: 28723.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00085
Location and strand information: 107766 - 111143 (+)
Family: null
Protein type: null
Protein description: Transcription-repair-coupling factor

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00086
Location and strand information: 111173 - 113077 (+)
Family: 4.C.1.1.14
Protein type: TC
Protein description: Long-chain-fatty-acid--CoA ligase FadD15

Gene clsuter ID: MGYG000002449_1|CGC1
Gene ID: MGYG000002449_00087
Location and strand information: 113135 - 115768 (+)
Family: GH2
Protein type: CAZyme
Protein description: Exo-beta-D-glucosaminidase
Protein isoelectric point: 5.8814
Protein molecular weight: 100474.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002449_00080	hypothetical protein	CAZyme	100211	102559	+	GH20
MGYG000002449_00081	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	102703	105153	-	GH51
MGYG000002449_00082	Transcriptional regulatory protein SrrA	STP	105270	105632	+	Response_reg
MGYG000002449_00083	Sensor histidine kinase RcsC	STP	105728	106846	+	Response_reg\| HisKA\| HATPase_c
MGYG000002449_00084	Polyprenol monophosphomannose synthase	CAZyme	106921	107679	-	GT2
MGYG000002449_00085	Transcription-repair-coupling factor	null	107766	111143	+	UvrB_inter\| CarD_CdnL_TRCF\| DEAD\| Helicase_C\| TRCF
MGYG000002449_00086	Long-chain-fatty-acid--CoA ligase FadD15	TC	111173	113077	+	4.C.1.1.14
MGYG000002449_00087	Exo-beta-D-glucosaminidase	CAZyme	113135	115768	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature