dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00623
Location and strand information: 309821 - 312352 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8089
Protein molecular weight: 96160.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00624
Location and strand information: 312361 - 315189 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9081
Protein molecular weight: 105850.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00625
Location and strand information: 315339 - 317168 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.2689
Protein molecular weight: 68089.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00626
Location and strand information: 317206 - 318729 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7681
Protein molecular weight: 56106.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00627
Location and strand information: 318849 - 320306 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00628
Location and strand information: 320373 - 321626 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00629
Location and strand information: 321726 - 322757 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00630
Location and strand information: 322859 - 323668 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00631
Location and strand information: 323693 - 324991 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8139
Protein molecular weight: 49686.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00632
Location and strand information: 325125 - 326051 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00633
Location and strand information: 326328 - 329528 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00634
Location and strand information: 329542 - 331641 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00635
Location and strand information: 331865 - 333328 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4442
Protein molecular weight: 52837.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00636
Location and strand information: 333356 - 335227 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00637
Location and strand information: 335246 - 336514 (+)
Family: GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1398
Protein molecular weight: 47689.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_2|CGC6
Gene ID: MGYG000002455_00638
Location and strand information: 336763 - 339141 (+)
Family: 1.B.14.3.1
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002455_00623	hypothetical protein	CAZyme	309821	312352	+	GH105
MGYG000002455_00624	hypothetical protein	CAZyme	312361	315189	+	GH106
MGYG000002455_00625	Rhamnogalacturonan endolyase YesW	CAZyme	315339	317168	+	PL11
MGYG000002455_00626	hypothetical protein	CAZyme	317206	318729	+	GH28
MGYG000002455_00627	L-Rhamnulokinase	null	318849	320306	+	FGGY_N\| FGGY_C
MGYG000002455_00628	L-rhamnose isomerase	null	320373	321626	+	RhaA
MGYG000002455_00629	L-rhamnose-proton symporter	TC	321726	322757	+	2.A.7.6.1
MGYG000002455_00630	Rhamnulose-1-phosphate aldolase	null	322859	323668	+	Aldolase_II
MGYG000002455_00631	hypothetical protein	CAZyme	323693	324991	+	GH105
MGYG000002455_00632	HTH-type transcriptional activator RhaS	TF	325125	326051	+	HTH_AraC+HTH_AraC
MGYG000002455_00633	TonB-dependent receptor SusC	TC	326328	329528	+	1.B.14.6.1
MGYG000002455_00634	hypothetical protein	TC	329542	331641	+	8.A.46.1.3
MGYG000002455_00635	hypothetical protein	CAZyme	331865	333328	+	PL1_2\| PL1
MGYG000002455_00636	hypothetical protein	null	333356	335227	+	Fib_succ_major
MGYG000002455_00637	hypothetical protein	CAZyme	335246	336514	+	GH43
MGYG000002455_00638	Vitamin B12 transporter BtuB	TC	336763	339141	+	1.B.14.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature