dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01643
Location and strand information: 1742809 - 1744419 (-)
Family: 3.A.1.5.24
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YejF

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01644
Location and strand information: 1744419 - 1745267 (-)
Family: 3.A.1.5.38
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01645
Location and strand information: 1745267 - 1746211 (-)
Family: 3.A.1.5.37
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01646
Location and strand information: 1746211 - 1747827 (-)
Family: SBP_bac_5
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01647
Location and strand information: 1747974 - 1749161 (-)
Family: 1.B.15.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01648
Location and strand information: 1749275 - 1750795 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.8712
Protein molecular weight: 57401.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01649
Location and strand information: 1750808 - 1752211 (-)
Family: 2.A.2.3.6
Protein type: TC
Protein description: Putative glycoside/cation symporter YagG

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01650
Location and strand information: 1752618 - 1752947 (-)
Family: 2.A.7.1.3
Protein type: TC
Protein description: Multidrug transporter EmrE

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01651
Location and strand information: 1752952 - 1753521 (-)
Family: TetR_N
Protein type: STP
Protein description: HTH-type transcriptional regulator BetI

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01652
Location and strand information: 1753645 - 1753782 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01653
Location and strand information: 1753782 - 1754792 (-)
Family: 3.D.4.3.2
Protein type: TC
Protein description: Cytochrome bd-I ubiquinol oxidase subunit 2

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01654
Location and strand information: 1754792 - 1756201 (-)
Family: null
Protein type: null
Protein description: Cytochrome bd-I ubiquinol oxidase subunit 1

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01655
Location and strand information: 1756399 - 1757820 (+)
Family: GntR
Protein type: TF
Protein description: 2-aminoadipate transaminase

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01656
Location and strand information: 1758210 - 1759355 (+)
Family: 3.A.1.11.9
Protein type: TC
Protein description: Spermidine-binding periplasmic protein SpuE

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01657
Location and strand information: 1759369 - 1760382 (+)
Family: 3.A.1.11.9
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01658
Location and strand information: 1760384 - 1761328 (+)
Family: 3.A.1.11.9
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YdcU

Gene clsuter ID: MGYG000002460_1|CGC30
Gene ID: MGYG000002460_01659
Location and strand information: 1761318 - 1762124 (+)
Family: 3.A.1.11.9
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YdcV

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002460_01643	putative ABC transporter ATP-binding protein YejF	TC	1742809	1744419	-	3.A.1.5.24
MGYG000002460_01644	Glutathione transport system permease protein GsiD	TC	1744419	1745267	-	3.A.1.5.38
MGYG000002460_01645	Dipeptide transport system permease protein DppB	TC	1745267	1746211	-	3.A.1.5.37
MGYG000002460_01646	hypothetical protein	STP	1746211	1747827	-	SBP_bac_5
MGYG000002460_01647	hypothetical protein	TC	1747974	1749161	-	1.B.15.1.1
MGYG000002460_01648	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	1749275	1750795	-	GH51
MGYG000002460_01649	Putative glycoside/cation symporter YagG	TC	1750808	1752211	-	2.A.2.3.6
MGYG000002460_01650	Multidrug transporter EmrE	TC	1752618	1752947	-	2.A.7.1.3
MGYG000002460_01651	HTH-type transcriptional regulator BetI	STP	1752952	1753521	-	TetR_N
MGYG000002460_01652	hypothetical protein	null	1753645	1753782	-	DUF2474
MGYG000002460_01653	Cytochrome bd-I ubiquinol oxidase subunit 2	TC	1753782	1754792	-	3.D.4.3.2
MGYG000002460_01654	Cytochrome bd-I ubiquinol oxidase subunit 1	null	1754792	1756201	-	Cyt_bd_oxida_I
MGYG000002460_01655	2-aminoadipate transaminase	TF	1756399	1757820	+	GntR
MGYG000002460_01656	Spermidine-binding periplasmic protein SpuE	TC	1758210	1759355	+	3.A.1.11.9
MGYG000002460_01657	Spermidine/putrescine import ATP-binding protein PotA	TC	1759369	1760382	+	3.A.1.11.9
MGYG000002460_01658	Inner membrane ABC transporter permease protein YdcU	TC	1760384	1761328	+	3.A.1.11.9
MGYG000002460_01659	Inner membrane ABC transporter permease protein YdcV	TC	1761318	1762124	+	3.A.1.11.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature