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CAZyme Gene Cluster: MGYG000002462_17|CGC2

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002462_03881
Pectate disaccharide-lyase
CAZyme 19067 20740 + PL2| PL2_2
MGYG000002462_03882
Lactose transport system permease protein LacF
TC 20781 21671 + 3.A.1.1.11
MGYG000002462_03883
L-arabinose transport system permease protein AraQ
TC 21664 22584 + 3.A.1.1.11
MGYG000002462_03884
Trehalose import ATP-binding protein SugC
TC 22598 23725 + 3.A.1.1.11
MGYG000002462_03885
Putative ABC transporter substrate-binding protein YesO
TC 23741 25033 + 3.A.1.1.11
MGYG000002462_03886
Oligogalacturonate-specific porin KdgM
TC 25333 26031 + 1.B.35.1.1
MGYG000002462_03887
Inner membrane protein YdjM
null 26403 26951 + YdjM
MGYG000002462_03888
L-cystine uptake protein TcyP
TC 27171 28562 + 2.A.23.1.8
MGYG000002462_03889
N-acetylmuramoyl-L-alanine amidase AmiD
null 28774 29625 - Amidase_2| PG_binding_1
MGYG000002462_03890
Pectin degradation repressor protein KdgR
TF 29901 30692 - TrmB
MGYG000002462_03891
Oligogalacturonate lyase
CAZyme 30878 32044 - PL22_1| PL22
MGYG000002462_03892
Riboflavin transporter RibZ
TC 32379 33746 + 2.A.1.3.17
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002462_03881 PL2_e0|4.2.2.9 pectin
MGYG000002462_03891 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location