dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02077
Location and strand information: 469218 - 469862 (+)
Family: 3.A.1.12.5
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02078
Location and strand information: 470004 - 471215 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02079
Location and strand information: 471263 - 473152 (+)
Family: GT51
Protein type: CAZyme
Protein description: Monofunctional biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 6.562
Protein molecular weight: 72159.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02080
Location and strand information: 473571 - 477665 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02081
Location and strand information: 478428 - 481568 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02082
Location and strand information: 481588 - 483327 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02083
Location and strand information: 483343 - 484743 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02084
Location and strand information: 484790 - 487138 (+)
Family: GH10|CBM4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3351
Protein molecular weight: 86415.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02085
Location and strand information: 487193 - 487315 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02086
Location and strand information: 487358 - 489121 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.252
Protein molecular weight: 66401.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02087
Location and strand information: 489159 - 490829 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02088
Location and strand information: 490903 - 492399 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02089
Location and strand information: 492415 - 495114 (+)
Family: GH43_12|GH10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1697
Protein molecular weight: 100087.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02090
Location and strand information: 495134 - 496111 (+)
Family: 3.2.1.37|GH43_1|GH43
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.6931
Protein molecular weight: 37162.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02091
Location and strand information: 496129 - 497109 (+)
Family: null
Protein type: null
Protein description: scyllo-inositol 2-dehydrogenase (NADP(+)) IolU

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02092
Location and strand information: 497131 - 499161 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 6.8399
Protein molecular weight: 77630.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02093
Location and strand information: 499273 - 500463 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02094
Location and strand information: 500686 - 504786 (+)
Family: none
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02095
Location and strand information: 504891 - 506147 (-)
Family: GH8
Protein type: CAZyme
Protein description: Reducing end xylose-releasing exo-oligoxylanase
Protein isoelectric point: 6.603
Protein molecular weight: 48308.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02096
Location and strand information: 506186 - 509410 (-)
Family: CE1|CE6|GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7649
Protein molecular weight: 119272.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02097
Location and strand information: 509436 - 510317 (-)
Family: CE1
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Z
Protein isoelectric point: 6.5992
Protein molecular weight: 33722.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02098
Location and strand information: 510539 - 512509 (-)
Family: GH5|GH43|GH5_21
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6589
Protein molecular weight: 72750.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02099
Location and strand information: 512836 - 513585 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002470_3|CGC13
Gene ID: MGYG000002470_02100
Location and strand information: 513663 - 515870 (-)
Family: GH10|CBM4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3579
Protein molecular weight: 81560.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_02077	Vitamin B12 import ATP-binding protein BtuD	TC	469218	469862	+	3.A.1.12.5
MGYG000002470_02078	hypothetical protein	null	470004	471215	+	No domain
MGYG000002470_02079	Monofunctional biosynthetic peptidoglycan transglycosylase	CAZyme	471263	473152	+	GT51
MGYG000002470_02080	Sensor histidine kinase RcsC	TF	473571	477665	-	HTH_AraC+HTH_AraC
MGYG000002470_02081	TonB-dependent receptor SusC	TC	478428	481568	+	1.B.14.6.1
MGYG000002470_02082	SusD-like protein	null	481588	483327	+	SusD-like_3\| SusD_RagB
MGYG000002470_02083	hypothetical protein	null	483343	484743	+	SGBP_B_XBD
MGYG000002470_02084	hypothetical protein	CAZyme	484790	487138	+	GH10\| CBM4
MGYG000002470_02085	hypothetical protein	null	487193	487315	-	No domain
MGYG000002470_02086	hypothetical protein	CAZyme	487358	489121	+	GH35
MGYG000002470_02087	hypothetical protein	null	489159	490829	+	SASA\| Glyco_hydro_2_N\| SASA
MGYG000002470_02088	Inner membrane symporter YicJ	TC	490903	492399	+	2.A.2.3.4
MGYG000002470_02089	hypothetical protein	CAZyme	492415	495114	+	GH43_12\| GH10
MGYG000002470_02090	Xylosidase/arabinosidase	CAZyme	495134	496111	+	3.2.1.37\| GH43_1\| GH43
MGYG000002470_02091	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	null	496129	497109	+	GFO_IDH_MocA\| GFO_IDH_MocA_C
MGYG000002470_02092	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	497131	499161	+	GH67
MGYG000002470_02093	hypothetical protein	null	499273	500463	+	Peptidase_C11
MGYG000002470_02094	Sensor histidine kinase RcsC	TF	500686	504786	+	none
MGYG000002470_02095	Reducing end xylose-releasing exo-oligoxylanase	CAZyme	504891	506147	-	GH8
MGYG000002470_02096	hypothetical protein	CAZyme	506186	509410	-	CE1\| CE6\| GH95
MGYG000002470_02097	Endo-1,4-beta-xylanase Z	CAZyme	509436	510317	-	CE1
MGYG000002470_02098	hypothetical protein	CAZyme	510539	512509	-	GH5\| GH43\| GH5_21
MGYG000002470_02099	hypothetical protein	null	512836	513585	-	No domain
MGYG000002470_02100	hypothetical protein	CAZyme	513663	515870	-	GH10\| CBM4
Protein ID	Protein Name	Type	Start	End	Strand	Signature

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002470_02079	GT51_e16
MGYG000002470_02084
MGYG000002470_02086	GH35_e24
MGYG000002470_02089	GH10_e61
MGYG000002470_02090	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000002470_02092	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000002470_02095	GH8_e30\|3.2.1.8\|3.2.1.156	xylan
MGYG000002470_02096	GH95_e0\|CE6_e7\|CE1_e61\|3.2.1.-\|3.1.1.72	xylan\|pectin
MGYG000002470_02097	CE1_e69
MGYG000002470_02098	GH5_e31\|GH43_e200\|3.2.1.8	xylan
MGYG000002470_02100	GH10_e9\|CBM4_e10\|3.2.1.8	xylan