dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03196
Location and strand information: 223486 - 224874 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9216
Protein molecular weight: 53131.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03197
Location and strand information: 224906 - 227734 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.47
Protein molecular weight: 105747.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03198
Location and strand information: 227912 - 229369 (+)
Family: null
Protein type: null
Protein description: L-Rhamnulokinase

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03199
Location and strand information: 229436 - 230689 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03200
Location and strand information: 230788 - 231819 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03201
Location and strand information: 231843 - 232652 (+)
Family: null
Protein type: null
Protein description: Rhamnulose-1-phosphate aldolase

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03202
Location and strand information: 232721 - 234019 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.521
Protein molecular weight: 49808.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03203
Location and strand information: 234147 - 235073 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002470_5|CGC4
Gene ID: MGYG000002470_03204
Location and strand information: 235701 - 238601 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5103
Protein molecular weight: 108328.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002470_03196	hypothetical protein	CAZyme	223486	224874	+	GH105
MGYG000002470_03197	hypothetical protein	CAZyme	224906	227734	+	GH106
MGYG000002470_03198	L-Rhamnulokinase	null	227912	229369	+	FGGY_N\| FGGY_C
MGYG000002470_03199	L-rhamnose isomerase	null	229436	230689	+	RhaA
MGYG000002470_03200	L-rhamnose-proton symporter	TC	230788	231819	+	2.A.7.6.1
MGYG000002470_03201	Rhamnulose-1-phosphate aldolase	null	231843	232652	+	Aldolase_II
MGYG000002470_03202	hypothetical protein	CAZyme	232721	234019	+	GH105
MGYG000002470_03203	HTH-type transcriptional activator RhaS	TF	234147	235073	+	HTH_AraC+HTH_AraC
MGYG000002470_03204	Beta-galactosidase	CAZyme	235701	238601	+	GH2
Protein ID	Protein Name	Type	Start	End	Strand	Signature