dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01543
Location and strand information: 1547926 - 1550469 (-)
Family: GH39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.6802
Protein molecular weight: 92930.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01544
Location and strand information: 1550854 - 1552293 (-)
Family: 2.A.1.3.30
Protein type: TC
Protein description: Multidrug export protein EmrB

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01545
Location and strand information: 1552565 - 1552687 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01546
Location and strand information: 1552715 - 1554412 (+)
Family: null
Protein type: null
Protein description: Oleate hydratase

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01547
Location and strand information: 1554809 - 1556917 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase Mel36A
Protein isoelectric point: 4.8308
Protein molecular weight: 80317.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01548
Location and strand information: 1557188 - 1557523 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01549
Location and strand information: 1557586 - 1558542 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01550
Location and strand information: 1558694 - 1560034 (+)
Family: 2.A.1.2.93
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01551
Location and strand information: 1560049 - 1562016 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.7993
Protein molecular weight: 74514.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01552
Location and strand information: 1562128 - 1563063 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01553
Location and strand information: 1563399 - 1565579 (+)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7744
Protein molecular weight: 83987.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01554
Location and strand information: 1565602 - 1567968 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002472_1|CGC15
Gene ID: MGYG000002472_01555
Location and strand information: 1568059 - 1569453 (+)
Family: 2.A.2.3.3
Protein type: TC
Protein description: Isoprimeverose transporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is carrageenan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002472_01543	hypothetical protein	CAZyme	1547926	1550469	-	GH39
MGYG000002472_01544	Multidrug export protein EmrB	TC	1550854	1552293	-	2.A.1.3.30
MGYG000002472_01545	hypothetical protein	null	1552565	1552687	+	No domain
MGYG000002472_01546	Oleate hydratase	null	1552715	1554412	+	MCRA
MGYG000002472_01547	Alpha-galactosidase Mel36A	CAZyme	1554809	1556917	+	GH36
MGYG000002472_01548	hypothetical protein	null	1557188	1557523	+	No domain
MGYG000002472_01549	HTH-type transcriptional activator RhaR	TF	1557586	1558542	-	HTH_AraC+HTH_AraC
MGYG000002472_01550	hypothetical protein	TC	1558694	1560034	+	2.A.1.2.93
MGYG000002472_01551	Non-reducing end beta-L-arabinofuranosidase	CAZyme	1560049	1562016	+	GH127
MGYG000002472_01552	HTH-type transcriptional activator RhaS	TF	1562128	1563063	-	HTH_AraC
MGYG000002472_01553	hypothetical protein	CAZyme	1563399	1565579	+	GH146
MGYG000002472_01554	hypothetical protein	null	1565602	1567968	+	No domain
MGYG000002472_01555	Isoprimeverose transporter	TC	1568059	1569453	+	2.A.2.3.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature