dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00699
Location and strand information: 202239 - 203459 (-)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein F

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00700
Location and strand information: 203456 - 204949 (-)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein E

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00701
Location and strand information: 204946 - 205395 (-)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00702
Location and strand information: 205687 - 206580 (-)
Family: null
Protein type: null
Protein description: Nicotinate-nucleotide pyrophosphorylase [carboxylating]

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00703
Location and strand information: 206675 - 207247 (+)
Family: null
Protein type: null
Protein description: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00704
Location and strand information: 207308 - 208162 (+)
Family: 9.B.125.1.1
Protein type: TC
Protein description: Protein AmpE

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00705
Location and strand information: 208233 - 209210 (-)
Family: GH43|CBM42|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1958
Protein molecular weight: 37196.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00706
Location and strand information: 209203 - 210645 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000002474_2|CGC6
Gene ID: MGYG000002474_00707
Location and strand information: 210859 - 212229 (-)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002474_00699	Type II secretion system protein F	TC	202239	203459	-	3.A.15.2.1
MGYG000002474_00700	Type II secretion system protein E	TC	203456	204949	-	3.A.15.2.1
MGYG000002474_00701	hypothetical protein	TC	204946	205395	-	3.A.15.2.1
MGYG000002474_00702	Nicotinate-nucleotide pyrophosphorylase [carboxylating]	null	205687	206580	-	QRPTase_N\| QRPTase_C
MGYG000002474_00703	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	null	206675	207247	+	Amidase_2
MGYG000002474_00704	Protein AmpE	TC	207308	208162	+	9.B.125.1.1
MGYG000002474_00705	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	208233	209210	-	GH43\| CBM42\| GH43_26
MGYG000002474_00706	Inner membrane symporter YicJ	TC	209203	210645	-	2.A.2.3.4
MGYG000002474_00707	Aromatic amino acid transport protein AroP	TC	210859	212229	-	2.A.3.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature