dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00733
Location and strand information: 1031304 - 1034591 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00734
Location and strand information: 1034747 - 1035745 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00735
Location and strand information: 1035806 - 1036396 (-)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00736
Location and strand information: 1036846 - 1038387 (-)
Family: GH28|GH43_10|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.6256
Protein molecular weight: 58478.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00737
Location and strand information: 1038483 - 1040639 (-)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase AgaA
Protein isoelectric point: 6.635
Protein molecular weight: 82524.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00738
Location and strand information: 1040827 - 1041723 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00739
Location and strand information: 1041736 - 1043706 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00740
Location and strand information: 1043799 - 1046741 (-)
Family: CBM32|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.1296
Protein molecular weight: 111218.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00741
Location and strand information: 1046771 - 1047793 (-)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00742
Location and strand information: 1047883 - 1049502 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00743
Location and strand information: 1049548 - 1052601 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00744
Location and strand information: 1052641 - 1054668 (-)
Family: GH36|GH27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9077
Protein molecular weight: 76412.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00745
Location and strand information: 1054876 - 1058907 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00746
Location and strand information: 1058989 - 1060977 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.7256
Protein molecular weight: 75393.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00747
Location and strand information: 1060974 - 1064315 (-)
Family: TPR_2+TPR_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00748
Location and strand information: 1064327 - 1065721 (-)
Family: 2.A.1.1.55
Protein type: TC
Protein description: D-xylose-proton symporter

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00749
Location and strand information: 1065909 - 1068311 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3877
Protein molecular weight: 89010.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00750
Location and strand information: 1068486 - 1070702 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.809
Protein molecular weight: 83915.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00751
Location and strand information: 1070977 - 1074444 (+)
Family: null
Protein type: null
Protein description: ATP-dependent RecD-like DNA helicase

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00752
Location and strand information: 1074545 - 1075726 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC22
Gene ID: MGYG000002478_00753
Location and strand information: 1075737 - 1076783 (-)
Family: 9.B.97.3.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_00733	TonB-dependent receptor SusC	TC	1031304	1034591	-	1.B.14.6.1
MGYG000002478_00734	hypothetical protein	STP	1034747	1035745	-	FecR
MGYG000002478_00735	hypothetical protein	TF	1035806	1036396	-	GerE
MGYG000002478_00736	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	1036846	1038387	-	GH28\| GH43_10\| GH43
MGYG000002478_00737	Alpha-galactosidase AgaA	CAZyme	1038483	1040639	-	GH36
MGYG000002478_00738	HTH-type transcriptional activator RhaR	TF	1040827	1041723	+	HTH_AraC+HTH_AraC
MGYG000002478_00739	hypothetical protein	null	1041736	1043706	-	SASA\| SASA
MGYG000002478_00740	Beta-galactosidase	CAZyme	1043799	1046741	-	CBM32\| GH2
MGYG000002478_00741	Aldose 1-epimerase	null	1046771	1047793	-	Aldose_epim
MGYG000002478_00742	hypothetical protein	null	1047883	1049502	-	SusD-like_3\| SusD_RagB
MGYG000002478_00743	TonB-dependent receptor SusC	TC	1049548	1052601	-	1.B.14.6.1
MGYG000002478_00744	hypothetical protein	CAZyme	1052641	1054668	-	GH36\| GH27
MGYG000002478_00745	Sensor histidine kinase RcsC	TF	1054876	1058907	-	HTH_AraC
MGYG000002478_00746	Retaining alpha-galactosidase	CAZyme	1058989	1060977	-	GH97
MGYG000002478_00747	hypothetical protein	STP	1060974	1064315	-	TPR_2\| TPR_1
MGYG000002478_00748	D-xylose-proton symporter	TC	1064327	1065721	-	2.A.1.1.55
MGYG000002478_00749	hypothetical protein	CAZyme	1065909	1068311	-	GH95
MGYG000002478_00750	hypothetical protein	CAZyme	1068486	1070702	-	GH92
MGYG000002478_00751	ATP-dependent RecD-like DNA helicase	null	1070977	1074444	+	AAA_11\| AAA_12\| PLDc_2
MGYG000002478_00752	hypothetical protein	null	1074545	1075726	-	DUF418
MGYG000002478_00753	hypothetical protein	TC	1075737	1076783	-	9.B.97.3.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature