dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00855
Location and strand information: 1178380 - 1180767 (-)
Family: 1.B.14.3.1
Protein type: TC
Protein description: Vitamin B12 transporter BtuB

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00856
Location and strand information: 1180934 - 1183774 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.1723
Protein molecular weight: 108452.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00857
Location and strand information: 1183790 - 1186372 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2346
Protein molecular weight: 98573.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00858
Location and strand information: 1186470 - 1188167 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00859
Location and strand information: 1188190 - 1191516 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00860
Location and strand information: 1191669 - 1194548 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00861
Location and strand information: 1194849 - 1195088 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00862
Location and strand information: 1195169 - 1197595 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1917
Protein molecular weight: 92696.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00863
Location and strand information: 1197598 - 1198596 (-)
Family: GH95|GH0|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2199
Protein molecular weight: 37747
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00864
Location and strand information: 1198601 - 1201012 (-)
Family: GH127
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3075
Protein molecular weight: 90014.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00865
Location and strand information: 1201039 - 1203432 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6376
Protein molecular weight: 91543.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00866
Location and strand information: 1203459 - 1205003 (-)
Family: GH43_8|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2238
Protein molecular weight: 57692.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00867
Location and strand information: 1205016 - 1207085 (-)
Family: CBM13|GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1905
Protein molecular weight: 78398.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00868
Location and strand information: 1207211 - 1209838 (-)
Family: GH2|CBM57
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.5935
Protein molecular weight: 100298.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00869
Location and strand information: 1209941 - 1211557 (-)
Family: 8.A.46.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00870
Location and strand information: 1211603 - 1214656 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00871
Location and strand information: 1214908 - 1218903 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00872
Location and strand information: 1218963 - 1219592 (+)
Family: null
Protein type: null
Protein description: DNA-3-methyladenine glycosylase 1

Gene clsuter ID: MGYG000002478_1|CGC24
Gene ID: MGYG000002478_00873
Location and strand information: 1220367 - 1220615 (-)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_00855	Vitamin B12 transporter BtuB	TC	1178380	1180767	-	1.B.14.3.1
MGYG000002478_00856	Beta-galactosidase	CAZyme	1180934	1183774	-	GH2
MGYG000002478_00857	hypothetical protein	CAZyme	1183790	1186372	-	GH115
MGYG000002478_00858	SusD-like protein	null	1186470	1188167	-	SusD-like_3\| SusD_RagB
MGYG000002478_00859	TonB-dependent receptor SusC	TC	1188190	1191516	-	1.B.14.6.1
MGYG000002478_00860	HTH-type transcriptional activator RhaR	TF	1191669	1194548	-	HTH_AraC
MGYG000002478_00861	hypothetical protein	null	1194849	1195088	-	No domain
MGYG000002478_00862	hypothetical protein	CAZyme	1195169	1197595	-	GH146
MGYG000002478_00863	hypothetical protein	CAZyme	1197598	1198596	-	GH95\| GH0\| GH43_18
MGYG000002478_00864	hypothetical protein	CAZyme	1198601	1201012	-	GH127
MGYG000002478_00865	hypothetical protein	CAZyme	1201039	1203432	-	GH146
MGYG000002478_00866	hypothetical protein	CAZyme	1203459	1205003	-	GH43_8\| GH43
MGYG000002478_00867	hypothetical protein	CAZyme	1205016	1207085	-	CBM13\| GH146
MGYG000002478_00868	Beta-galactosidase	CAZyme	1207211	1209838	-	GH2\| CBM57
MGYG000002478_00869	hypothetical protein	TC	1209941	1211557	-	8.A.46.1.1
MGYG000002478_00870	TonB-dependent receptor SusC	TC	1211603	1214656	-	1.B.14.6.1
MGYG000002478_00871	Sensor histidine kinase RcsC	TF	1214908	1218903	+	HTH_AraC
MGYG000002478_00872	DNA-3-methyladenine glycosylase 1	null	1218963	1219592	+	Adenine_glyco
MGYG000002478_00873	hypothetical protein	TC	1220367	1220615	-	8.A.46.1.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature