dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01858
Location and strand information: 2384722 - 2388078 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01859
Location and strand information: 2388102 - 2389712 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01860
Location and strand information: 2389804 - 2392764 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.3203
Protein molecular weight: 112226.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01861
Location and strand information: 2392905 - 2394032 (+)
Family: GH137
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.5196
Protein molecular weight: 43749.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01862
Location and strand information: 2394120 - 2395676 (+)
Family: GH43_12|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 7.7281
Protein molecular weight: 57894.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01863
Location and strand information: 2396230 - 2399016 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01864
Location and strand information: 2399162 - 2400796 (+)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.8595
Protein molecular weight: 61498.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01865
Location and strand information: 2400908 - 2403886 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.579
Protein molecular weight: 113563.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01866
Location and strand information: 2403942 - 2405132 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 5.6542
Protein molecular weight: 45492.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01867
Location and strand information: 2405122 - 2406351 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0139
Protein molecular weight: 46696.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01868
Location and strand information: 2406632 - 2409961 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4787
Protein molecular weight: 124353.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01869
Location and strand information: 2410017 - 2412884 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3139
Protein molecular weight: 108379.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01870
Location and strand information: 2413169 - 2415862 (+)
Family: PL26
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7486
Protein molecular weight: 102541.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01871
Location and strand information: 2416091 - 2419099 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01872
Location and strand information: 2419119 - 2420732 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01873
Location and strand information: 2420960 - 2422150 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 6.5055
Protein molecular weight: 45152.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01874
Location and strand information: 2422140 - 2423372 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9471
Protein molecular weight: 46958.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01875
Location and strand information: 2423547 - 2426096 (+)
Family: GH28|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4654
Protein molecular weight: 95908.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01876
Location and strand information: 2426222 - 2430475 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01877
Location and strand information: 2430667 - 2432103 (+)
Family: null
Protein type: null
Protein description: Lactaldehyde dehydrogenase

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01878
Location and strand information: 2432289 - 2433293 (+)
Family: GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5005
Protein molecular weight: 38089.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01879
Location and strand information: 2433362 - 2434825 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7893
Protein molecular weight: 55526.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01880
Location and strand information: 2434921 - 2435661 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01881
Location and strand information: 2435683 - 2439009 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01882
Location and strand information: 2439062 - 2440537 (-)
Family: 2.A.1.14.1
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01883
Location and strand information: 2440755 - 2441711 (-)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01884
Location and strand information: 2441730 - 2443121 (-)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01885
Location and strand information: 2443411 - 2444640 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.2926
Protein molecular weight: 47089.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01886
Location and strand information: 2444655 - 2445605 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.3429
Protein molecular weight: 35856.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01887
Location and strand information: 2445824 - 2449054 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01888
Location and strand information: 2449058 - 2451211 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01889
Location and strand information: 2451241 - 2451417 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01890
Location and strand information: 2451619 - 2453640 (+)
Family: GH33
Protein type: CAZyme
Protein description: Hercynine oxygenase
Protein isoelectric point: 6.4689
Protein molecular weight: 75945.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01891
Location and strand information: 2453878 - 2457288 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01892
Location and strand information: 2457319 - 2459355 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01893
Location and strand information: 2459365 - 2460864 (+)
Family: GH43_9|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3922
Protein molecular weight: 56589.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01894
Location and strand information: 2460902 - 2462509 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01895
Location and strand information: 2462702 - 2465248 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01896
Location and strand information: 2465311 - 2466831 (+)
Family: CE8|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6573
Protein molecular weight: 55692.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01897
Location and strand information: 2466896 - 2467459 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01898
Location and strand information: 2467530 - 2468462 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01899
Location and strand information: 2468518 - 2471817 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01900
Location and strand information: 2471836 - 2473524 (+)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01901
Location and strand information: 2473610 - 2476645 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0504
Protein molecular weight: 114682.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01902
Location and strand information: 2476642 - 2480010 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.9656
Protein molecular weight: 126803.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01903
Location and strand information: 2480024 - 2482408 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6016
Protein molecular weight: 91740.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01904
Location and strand information: 2482426 - 2484426 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01905
Location and strand information: 2484517 - 2485008 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01906
Location and strand information: 2485197 - 2486810 (+)
Family: PL10_2|PL10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.379
Protein molecular weight: 61357.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01907
Location and strand information: 2486832 - 2487992 (+)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1709
Protein molecular weight: 43464.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002478_1|CGC44
Gene ID: MGYG000002478_01908
Location and strand information: 2487999 - 2489726 (+)
Family: CE12|CE8|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8508
Protein molecular weight: 64058.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002478_01860	GH2_e119
MGYG000002478_01861	GH137_e0\|3.2.1.31\|3.2.1.185	pectin
MGYG000002478_01862	GH43_e27
MGYG000002478_01864	GH43_e184\|3.2.1.55	xylan
MGYG000002478_01865	GH2_e11\|3.2.1.31	beta-glucuronan
MGYG000002478_01866	GH88_e23\|3.2.1.-	hostglycan
MGYG000002478_01867
MGYG000002478_01868	GH106_e9
MGYG000002478_01869	GH2_e22
MGYG000002478_01870	PL26_e0
MGYG000002478_01873	GH88_e26
MGYG000002478_01874
MGYG000002478_01875	GH28_e22
MGYG000002478_01878	GH43_e130\|3.2.1.55	xylan
MGYG000002478_01879	GH140_e1\|3.2.1.-	pectin
MGYG000002478_01885	GH105_e8\|3.2.1.-	pectin
MGYG000002478_01886	CE8_e34
MGYG000002478_01890	GH33_e38
MGYG000002478_01893	GH43_e46
MGYG000002478_01896	CE8_e16
MGYG000002478_01901	GH2_e58
MGYG000002478_01902	GH2_e58
MGYG000002478_01903	GH31_e16
MGYG000002478_01906	PL10_e15\|4.2.2.2	pectin
MGYG000002478_01907
MGYG000002478_01908	CE8_e6\|CE4_e36\|CE12_e9

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002478_01858	TonB-dependent receptor SusC	TC	2384722	2388078	+	1.B.14.6.1
MGYG000002478_01859	hypothetical protein	TC	2388102	2389712	+	8.A.46.1.3
MGYG000002478_01860	Beta-galactosidase	CAZyme	2389804	2392764	+	GH2
MGYG000002478_01861	hypothetical protein	CAZyme	2392905	2394032	+	GH137
MGYG000002478_01862	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	2394120	2395676	+	GH43_12\| GH43
MGYG000002478_01863	HTH-type transcriptional activator RhaR	TF	2396230	2399016	+	HTH_AraC
MGYG000002478_01864	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	2399162	2400796	+	GH43_10\| GH43
MGYG000002478_01865	Beta-galactosidase	CAZyme	2400908	2403886	+	GH2
MGYG000002478_01866	Unsaturated chondroitin disaccharide hydrolase	CAZyme	2403942	2405132	+	GH88
MGYG000002478_01867	hypothetical protein	CAZyme	2405122	2406351	+	GH154
MGYG000002478_01868	hypothetical protein	CAZyme	2406632	2409961	+	GH106
MGYG000002478_01869	Beta-galactosidase	CAZyme	2410017	2412884	+	GH2
MGYG000002478_01870	hypothetical protein	CAZyme	2413169	2415862	+	PL26
MGYG000002478_01871	TonB-dependent receptor SusC	TC	2416091	2419099	+	1.B.14.6.1
MGYG000002478_01872	SusD-like protein	null	2419119	2420732	+	SusD-like_3\| SusD_RagB
MGYG000002478_01873	Unsaturated chondroitin disaccharide hydrolase	CAZyme	2420960	2422150	+	GH88
MGYG000002478_01874	hypothetical protein	CAZyme	2422140	2423372	+	GH154
MGYG000002478_01875	hypothetical protein	CAZyme	2423547	2426096	+	GH28\| GH43_24
MGYG000002478_01876	Sensor histidine kinase RcsC	TF	2426222	2430475	+	HTH_AraC
MGYG000002478_01877	Lactaldehyde dehydrogenase	null	2430667	2432103	+	Aldedh
MGYG000002478_01878	hypothetical protein	CAZyme	2432289	2433293	+	GH43_18\| GH43
MGYG000002478_01879	hypothetical protein	CAZyme	2433362	2434825	+	GH140
MGYG000002478_01880	hypothetical protein	null	2434921	2435661	+	No domain
MGYG000002478_01881	hypothetical protein	null	2435683	2439009	+	AAA_11\| AAA_11\| AAA_12
MGYG000002478_01882	Hexuronate transporter	TC	2439062	2440537	-	2.A.1.14.1
MGYG000002478_01883	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	2440755	2441711	-	KduI
MGYG000002478_01884	PTS system galactitol-specific EIIC component	TC	2441730	2443121	-	4.A.5.1.4
MGYG000002478_01885	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	2443411	2444640	+	GH105
MGYG000002478_01886	Pectinesterase A	CAZyme	2444655	2445605	+	CE8
MGYG000002478_01887	TonB-dependent receptor SusC	TC	2445824	2449054	+	1.B.14.6.1
MGYG000002478_01888	hypothetical protein	null	2449058	2451211	+	SusD-like_3\| SusD_RagB
MGYG000002478_01889	hypothetical protein	null	2451241	2451417	+	No domain
MGYG000002478_01890	Hercynine oxygenase	CAZyme	2451619	2453640	+	GH33
MGYG000002478_01891	hypothetical protein	TC	2453878	2457288	+	1.B.14.6.1
MGYG000002478_01892	hypothetical protein	null	2457319	2459355	+	SusD-like_3\| SusD_RagB
MGYG000002478_01893	hypothetical protein	CAZyme	2459365	2460864	+	GH43_9\| GH43
MGYG000002478_01894	hypothetical protein	null	2460902	2462509	+	DUF5060\| DUF4038\| DUF5605
MGYG000002478_01895	hypothetical protein	null	2462702	2465248	+	No domain
MGYG000002478_01896	hypothetical protein	CAZyme	2465311	2466831	+	CE8\| CE0
MGYG000002478_01897	hypothetical protein	TF	2466896	2467459	+	GerE
MGYG000002478_01898	hypothetical protein	STP	2467530	2468462	+	FecR
MGYG000002478_01899	TonB-dependent receptor SusC	TC	2468518	2471817	+	1.B.14.6.1
MGYG000002478_01900	hypothetical protein	TC	2471836	2473524	+	8.A.46.1.6
MGYG000002478_01901	Beta-galactosidase	CAZyme	2473610	2476645	+	GH2
MGYG000002478_01902	Beta-galactosidase	CAZyme	2476642	2480010	+	GH2
MGYG000002478_01903	hypothetical protein	CAZyme	2480024	2482408	+	GH31
MGYG000002478_01904	hypothetical protein	null	2482426	2484426	+	AXE1
MGYG000002478_01905	hypothetical protein	null	2484517	2485008	-	Cupin_2
MGYG000002478_01906	hypothetical protein	CAZyme	2485197	2486810	+	PL10_2\| PL10
MGYG000002478_01907	hypothetical protein	CAZyme	2486832	2487992	+	PL10_1\| CE19
MGYG000002478_01908	hypothetical protein	CAZyme	2487999	2489726	+	CE12\| CE8\| CE4
Protein ID	Protein Name	Type	Start	End	Strand	Signature