dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01371
Location and strand information: 372910 - 373872 (-)
Family: 1.B.21.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01372
Location and strand information: 373894 - 375033 (-)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0539
Protein molecular weight: 42992.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01373
Location and strand information: 375144 - 376265 (-)
Family: 3.A.1.1.6
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01374
Location and strand information: 376303 - 377142 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01375
Location and strand information: 377139 - 378866 (-)
Family: PL2|PL2_2
Protein type: CAZyme
Protein description: Pectate disaccharide-lyase
Protein isoelectric point: 8.538
Protein molecular weight: 65745.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01376
Location and strand information: 378878 - 380170 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01377
Location and strand information: 380205 - 381482 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01378
Location and strand information: 381728 - 383056 (+)
Family: 2.A.66.1.18
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01379
Location and strand information: 383093 - 383782 (-)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional repressor RspR

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01380
Location and strand information: 383966 - 385105 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.9481
Protein molecular weight: 44971.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01381
Location and strand information: 385095 - 385973 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01382
Location and strand information: 385978 - 386907 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01383
Location and strand information: 386932 - 388470 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1721
Protein molecular weight: 57938.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01384
Location and strand information: 388472 - 389308 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01385
Location and strand information: 389343 - 390116 (+)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000002485_2|CGC5
Gene ID: MGYG000002485_01386
Location and strand information: 390136 - 391101 (+)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.2614
Protein molecular weight: 36747.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002485_01371	hypothetical protein	TC	372910	373872	-	1.B.21.2.1
MGYG000002485_01372	hypothetical protein	CAZyme	373894	375033	-	PL10_1\| CE19
MGYG000002485_01373	Trehalose import ATP-binding protein SugC	TC	375144	376265	-	3.A.1.1.6
MGYG000002485_01374	hypothetical protein	null	376303	377142	-	AP_endonuc_2
MGYG000002485_01375	Pectate disaccharide-lyase	CAZyme	377139	378866	-	PL2\| PL2_2
MGYG000002485_01376	Putative ABC transporter substrate-binding protein YesO	TC	378878	380170	-	3.A.1.1.11
MGYG000002485_01377	Putative ABC transporter substrate-binding protein YesO	TC	380205	381482	-	3.A.1.1.11
MGYG000002485_01378	Multidrug export protein MepA	TC	381728	383056	+	2.A.66.1.18
MGYG000002485_01379	HTH-type transcriptional repressor RspR	TF	383093	383782	-	GntR
MGYG000002485_01380	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	383966	385105	+	GH105
MGYG000002485_01381	Lactose transport system permease protein LacF	TC	385095	385973	+	3.A.1.1.11
MGYG000002485_01382	L-arabinose transport system permease protein AraQ	TC	385978	386907	+	3.A.1.1.11
MGYG000002485_01383	hypothetical protein	CAZyme	386932	388470	+	GH28
MGYG000002485_01384	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	388472	389308	+	KduI
MGYG000002485_01385	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	389343	390116	+	adh_short_C2
MGYG000002485_01386	Pectinesterase A	CAZyme	390136	391101	+	CE8
Protein ID	Protein Name	Type	Start	End	Strand	Signature