dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00940
Location and strand information: 56138 - 56980 (-)
Family: GT25
Protein type: CAZyme
Protein description: Lipooligosaccharide biosynthesis protein lex-1
Protein isoelectric point: 8.632
Protein molecular weight: 32440.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00941
Location and strand information: 56999 - 58015 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9918
Protein molecular weight: 38558.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00942
Location and strand information: 58075 - 58734 (-)
Family: GT8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2185
Protein molecular weight: 25435.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00943
Location and strand information: 58812 - 58997 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00944
Location and strand information: 59009 - 59848 (-)
Family: GT25
Protein type: CAZyme
Protein description: Lipooligosaccharide biosynthesis protein lex-1
Protein isoelectric point: 6.572
Protein molecular weight: 31794.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00945
Location and strand information: 59848 - 60555 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.0028
Protein molecular weight: 27794.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00946
Location and strand information: 60572 - 60895 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1152
Protein molecular weight: 11654.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00947
Location and strand information: 60959 - 63022 (-)
Family: null
Protein type: null
Protein description: Glycine--tRNA ligase beta subunit

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00948
Location and strand information: 63139 - 64035 (-)
Family: null
Protein type: null
Protein description: Glycine--tRNA ligase alpha subunit

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00949
Location and strand information: 64207 - 64629 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase epsilon chain

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00950
Location and strand information: 64640 - 66037 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase subunit beta 1

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00951
Location and strand information: 66075 - 66950 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase gamma chain

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00952
Location and strand information: 66975 - 68522 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase subunit alpha

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00953
Location and strand information: 68533 - 69066 (-)
Family: 3.A.2.1.6
Protein type: TC
Protein description: ATP synthase subunit delta

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00954
Location and strand information: 69071 - 69541 (-)
Family: null
Protein type: null
Protein description: ATP synthase subunit b

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00955
Location and strand information: 69611 - 69847 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase subunit c

Gene clsuter ID: MGYG000002489_6|CGC1
Gene ID: MGYG000002489_00956
Location and strand information: 69904 - 70770 (-)
Family: 3.A.2.1.1
Protein type: TC
Protein description: ATP synthase subunit a

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002489_00940	Lipooligosaccharide biosynthesis protein lex-1	CAZyme	56138	56980	-	GT25
MGYG000002489_00941	hypothetical protein	CAZyme	56999	58015	-	GT2
MGYG000002489_00942	hypothetical protein	CAZyme	58075	58734	-	GT8
MGYG000002489_00943	hypothetical protein	null	58812	58997	-	No domain
MGYG000002489_00944	Lipooligosaccharide biosynthesis protein lex-1	CAZyme	59009	59848	-	GT25
MGYG000002489_00945	hypothetical protein	CAZyme	59848	60555	-	GT2
MGYG000002489_00946	hypothetical protein	CAZyme	60572	60895	-	GT2
MGYG000002489_00947	Glycine--tRNA ligase beta subunit	null	60959	63022	-	tRNA_synt_2f\| DALR_1
MGYG000002489_00948	Glycine--tRNA ligase alpha subunit	null	63139	64035	-	tRNA-synt_2e
MGYG000002489_00949	ATP synthase epsilon chain	TC	64207	64629	-	3.A.2.1.1
MGYG000002489_00950	ATP synthase subunit beta 1	TC	64640	66037	-	3.A.2.1.1
MGYG000002489_00951	ATP synthase gamma chain	TC	66075	66950	-	3.A.2.1.1
MGYG000002489_00952	ATP synthase subunit alpha	TC	66975	68522	-	3.A.2.1.1
MGYG000002489_00953	ATP synthase subunit delta	TC	68533	69066	-	3.A.2.1.6
MGYG000002489_00954	ATP synthase subunit b	null	69071	69541	-	ATP-synt_B
MGYG000002489_00955	ATP synthase subunit c	TC	69611	69847	-	3.A.2.1.1
MGYG000002489_00956	ATP synthase subunit a	TC	69904	70770	-	3.A.2.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature