dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00457
Location and strand information: 12394 - 13377 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.5074
Protein molecular weight: 36571.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00458
Location and strand information: 13374 - 15356 (+)
Family: null
Protein type: null
Protein description: Bifunctional polymyxin resistance protein ArnA

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00459
Location and strand information: 15353 - 16255 (+)
Family: null
Protein type: null
Protein description: putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00460
Location and strand information: 16252 - 17907 (+)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 9.5394
Protein molecular weight: 61670.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00461
Location and strand information: 17907 - 18242 (+)
Family: 2.A.7.22.2
Protein type: TC
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00462
Location and strand information: 18239 - 18631 (+)
Family: 2.A.7.22.1
Protein type: TC
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00463
Location and strand information: 18576 - 19196 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00464
Location and strand information: 19298 - 20347 (-)
Family: 2.A.86.1.2
Protein type: TC
Protein description: Putative transport protein YhhT

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00465
Location and strand information: 20492 - 21709 (+)
Family: 2.A.1.46.7
Protein type: TC
Protein description: putative MFS-type transporter YhhS

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00466
Location and strand information: 21714 - 22271 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00467
Location and strand information: 22344 - 23009 (-)
Family: 2.A.88.8.6
Protein type: TC
Protein description: Queuosine precursor transporter

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00468
Location and strand information: 23177 - 23419 (+)
Family: null
Protein type: null
Protein description: Sulfur carrier protein TusA

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00469
Location and strand information: 23616 - 23981 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00470
Location and strand information: 24131 - 24724 (-)
Family: 2.A.95.1.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00471
Location and strand information: 24904 - 26007 (+)
Family: null
Protein type: null
Protein description: Aspartate-semialdehyde dehydrogenase

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00472
Location and strand information: 26257 - 28443 (+)
Family: CBM48|GH13|GH13_9
Protein type: CAZyme
Protein description: 1,4-alpha-glucan branching enzyme GlgB
Protein isoelectric point: 6.438
Protein molecular weight: 84190.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00473
Location and strand information: 28440 - 30413 (+)
Family: GH13_11|CBM48|GH13
Protein type: CAZyme
Protein description: Glycogen debranching enzyme
Protein isoelectric point: 5.9754
Protein molecular weight: 73642.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00474
Location and strand information: 30431 - 31726 (+)
Family: null
Protein type: null
Protein description: Glucose-1-phosphate adenylyltransferase

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00475
Location and strand information: 31726 - 33159 (+)
Family: GT5
Protein type: CAZyme
Protein description: Glycogen synthase
Protein isoelectric point: 6.891
Protein molecular weight: 52702.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00476
Location and strand information: 33178 - 35625 (+)
Family: GT35
Protein type: CAZyme
Protein description: Maltodextrin phosphorylase
Protein isoelectric point: 6.0229
Protein molecular weight: 93249.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00477
Location and strand information: 35714 - 37222 (-)
Family: null
Protein type: null
Protein description: Aerobic glycerol-3-phosphate dehydrogenase

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00478
Location and strand information: 37411 - 37743 (+)
Family: Rhodanese
Protein type: STP
Protein description: Thiosulfate sulfurtransferase GlpE

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00479
Location and strand information: 37791 - 38621 (+)
Family: 9.B.104.1.1
Protein type: TC
Protein description: Rhomboid protease GlpG

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00480
Location and strand information: 38638 - 39396 (+)
Family: HTH_DeoR
Protein type: TF
Protein description: Glycerol-3-phosphate regulon repressor

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00481
Location and strand information: 39478 - 42183 (-)
Family: GerE
Protein type: TF
Protein description: HTH-type transcriptional regulator MalT

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00482
Location and strand information: 42768 - 45161 (+)
Family: GT35
Protein type: CAZyme
Protein description: Maltodextrin phosphorylase
Protein isoelectric point: 8.367
Protein molecular weight: 90185.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00483
Location and strand information: 45171 - 47249 (+)
Family: GH77
Protein type: CAZyme
Protein description: 4-alpha-glucanotransferase
Protein isoelectric point: 6.7772
Protein molecular weight: 77687.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002502_2|CGC1
Gene ID: MGYG000002502_00484
Location and strand information: 47337 - 48653 (-)
Family: 2.A.8.1.4
Protein type: TC
Protein description: High-affinity gluconate transporter

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002502_00457	GT2_e47\|2.4.1.-
MGYG000002502_00460	GT83_e0
MGYG000002502_00472	GH13_e90\|CBM48_e29\|2.4.1.18	alpha-glucan
MGYG000002502_00473	GH13_e55\|CBM48_e19\|3.2.1.68\|3.2.1.-\|2.4.1.25	starch\|glycogen
MGYG000002502_00475	GT5_e23\|2.4.1.21
MGYG000002502_00476	GT35_e0\|2.4.1.1
MGYG000002502_00482	GT35_e0\|2.4.1.1
MGYG000002502_00483	GH77_e0\|2.4.1.25	starch

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is starch

Substrate predicted by dbCAN-PUL is glycogen download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002502_00457	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	12394	13377	+	GT2
MGYG000002502_00458	Bifunctional polymyxin resistance protein ArnA	null	13374	15356	+	Formyl_trans_N\| Formyl_trans_C\| Epimerase
MGYG000002502_00459	putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD	null	15353	16255	+	Polysacc_deac_1
MGYG000002502_00460	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	16252	17907	+	GT83
MGYG000002502_00461	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE	TC	17907	18242	+	2.A.7.22.2
MGYG000002502_00462	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF	TC	18239	18631	+	2.A.7.22.1
MGYG000002502_00463	hypothetical protein	null	18576	19196	-	ACPS
MGYG000002502_00464	Putative transport protein YhhT	TC	19298	20347	-	2.A.86.1.2
MGYG000002502_00465	putative MFS-type transporter YhhS	TC	20492	21709	+	2.A.1.46.7
MGYG000002502_00466	hypothetical protein	null	21714	22271	-	DcrB
MGYG000002502_00467	Queuosine precursor transporter	TC	22344	23009	-	2.A.88.8.6
MGYG000002502_00468	Sulfur carrier protein TusA	null	23177	23419	+	TusA
MGYG000002502_00469	hypothetical protein	null	23616	23981	+	No domain
MGYG000002502_00470	hypothetical protein	TC	24131	24724	-	2.A.95.1.5
MGYG000002502_00471	Aspartate-semialdehyde dehydrogenase	null	24904	26007	+	Semialdhyde_dh\| Semialdhyde_dhC
MGYG000002502_00472	1,4-alpha-glucan branching enzyme GlgB	CAZyme	26257	28443	+	CBM48\| GH13\| GH13_9
MGYG000002502_00473	Glycogen debranching enzyme	CAZyme	28440	30413	+	GH13_11\| CBM48\| GH13
MGYG000002502_00474	Glucose-1-phosphate adenylyltransferase	null	30431	31726	+	NTP_transferase
MGYG000002502_00475	Glycogen synthase	CAZyme	31726	33159	+	GT5
MGYG000002502_00476	Maltodextrin phosphorylase	CAZyme	33178	35625	+	GT35
MGYG000002502_00477	Aerobic glycerol-3-phosphate dehydrogenase	null	35714	37222	-	DAO\| DAO_C
MGYG000002502_00478	Thiosulfate sulfurtransferase GlpE	STP	37411	37743	+	Rhodanese
MGYG000002502_00479	Rhomboid protease GlpG	TC	37791	38621	+	9.B.104.1.1
MGYG000002502_00480	Glycerol-3-phosphate regulon repressor	TF	38638	39396	+	HTH_DeoR
MGYG000002502_00481	HTH-type transcriptional regulator MalT	TF	39478	42183	-	GerE
MGYG000002502_00482	Maltodextrin phosphorylase	CAZyme	42768	45161	+	GT35
MGYG000002502_00483	4-alpha-glucanotransferase	CAZyme	45171	47249	+	GH77
MGYG000002502_00484	High-affinity gluconate transporter	TC	47337	48653	-	2.A.8.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature