dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01538
Location and strand information: 40208 - 41182 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 6.9287
Protein molecular weight: 36158.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01539
Location and strand information: 41182 - 42300 (+)
Family: GT4
Protein type: CAZyme
Protein description: GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase
Protein isoelectric point: 5.4704
Protein molecular weight: 42058.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01540
Location and strand information: 42301 - 43854 (+)
Family: 2.A.66.1.40
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01541
Location and strand information: 44030 - 45703 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01542
Location and strand information: 45895 - 47109 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000002509_12|CGC2
Gene ID: MGYG000002509_01543
Location and strand information: 47102 - 47698 (+)
Family: 9.B.18.1.2
Protein type: TC
Protein description: putative sugar transferase EpsL

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002509_01538	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	40208	41182	+	GT2
MGYG000002509_01539	GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase	CAZyme	41182	42300	+	GT4
MGYG000002509_01540	hypothetical protein	TC	42301	43854	+	2.A.66.1.40
MGYG000002509_01541	hypothetical protein	null	44030	45703	+	Choline_bind_1\| Choline_bind_1\| Choline_bind_1\| Choline_bind_1\| Choline_bind_3\| Choline_bind_1\| Choline_bind_3\| Choline_bind_1\| NLPC_P60
MGYG000002509_01542	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	45895	47109	+	Aminotran_1_2
MGYG000002509_01543	putative sugar transferase EpsL	TC	47102	47698	+	9.B.18.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature