dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00658
Location and strand information: 438577 - 439632 (+)
Family: 3.A.1.5.38
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00659
Location and strand information: 439629 - 440498 (+)
Family: 3.A.1.5.38
Protein type: TC
Protein description: putative D,D-dipeptide transport system permease protein DdpC

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00660
Location and strand information: 440488 - 441330 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Dipeptide transport ATP-binding protein DppD

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00661
Location and strand information: 441327 - 441998 (+)
Family: 3.A.1.5.34
Protein type: TC
Protein description: putative D,D-dipeptide transport ATP-binding protein DdpF

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00662
Location and strand information: 442131 - 443705 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: putative D,D-dipeptide-binding periplasmic protein DdpA

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00663
Location and strand information: 443936 - 445546 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00664
Location and strand information: 445543 - 446211 (-)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00665
Location and strand information: 446638 - 448149 (+)
Family: 1.B.54.1.9
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00666
Location and strand information: 448146 - 448796 (-)
Family: GerE
Protein type: TF
Protein description: Nitrate/nitrite response regulator protein NarL

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00667
Location and strand information: 448807 - 450591 (-)
Family: HATPase_c
Protein type: STP
Protein description: Nitrate/nitrite sensor protein NarX

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00668
Location and strand information: 450944 - 452338 (+)
Family: 2.A.1.8.1
Protein type: TC
Protein description: Nitrate/nitrite transporter NarK

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00669
Location and strand information: 453112 - 454014 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00670
Location and strand information: 454194 - 455156 (+)
Family: null
Protein type: null
Protein description: N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00671
Location and strand information: 455331 - 456380 (+)
Family: 9.B.146.1.7
Protein type: TC
Protein description: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00672
Location and strand information: 456450 - 457559 (+)
Family: 1.B.18.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00673
Location and strand information: 457569 - 459767 (+)
Family: 8.A.3.3.2
Protein type: TC
Protein description: Tyrosine-protein kinase wzc

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00674
Location and strand information: 459772 - 461070 (+)
Family: 2.A.66.5.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00675
Location and strand information: 461051 - 461899 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00676
Location and strand information: 461906 - 463060 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00677
Location and strand information: 463064 - 463969 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 9.617
Protein molecular weight: 34497.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00678
Location and strand information: 463971 - 465026 (+)
Family: GT4
Protein type: CAZyme
Protein description: Glycosyltransferase Gtf1
Protein isoelectric point: 9.2718
Protein molecular weight: 39196.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00679
Location and strand information: 465034 - 465777 (+)
Family: GT2
Protein type: CAZyme
Protein description: Putative teichuronic acid biosynthesis glycosyltransferase TuaG
Protein isoelectric point: 8.5324
Protein molecular weight: 28609.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00680
Location and strand information: 465780 - 467648 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00681
Location and strand information: 467941 - 471702 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 alpha chain

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00682
Location and strand information: 471699 - 473243 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 beta chain

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00683
Location and strand information: 473240 - 473962 (+)
Family: null
Protein type: null
Protein description: Nitrate reductase molybdenum cofactor assembly chaperone NarJ

Gene clsuter ID: MGYG000002518_11|CGC5
Gene ID: MGYG000002518_00684
Location and strand information: 473965 - 474642 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 gamma chain

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002518_00658	Dipeptide transport system permease protein DppB	TC	438577	439632	+	3.A.1.5.38
MGYG000002518_00659	putative D,D-dipeptide transport system permease protein DdpC	TC	439629	440498	+	3.A.1.5.38
MGYG000002518_00660	Dipeptide transport ATP-binding protein DppD	TC	440488	441330	+	3.A.1.5.2
MGYG000002518_00661	putative D,D-dipeptide transport ATP-binding protein DdpF	TC	441327	441998	+	3.A.1.5.34
MGYG000002518_00662	putative D,D-dipeptide-binding periplasmic protein DdpA	TC	442131	443705	+	3.A.1.5.39
MGYG000002518_00663	hypothetical protein	null	443936	445546	+	No domain
MGYG000002518_00664	hypothetical protein	TC	445543	446211	-	3.A.15.2.1
MGYG000002518_00665	hypothetical protein	TC	446638	448149	+	1.B.54.1.9
MGYG000002518_00666	Nitrate/nitrite response regulator protein NarL	TF	448146	448796	-	GerE
MGYG000002518_00667	Nitrate/nitrite sensor protein NarX	STP	448807	450591	-	HATPase_c
MGYG000002518_00668	Nitrate/nitrite transporter NarK	TC	450944	452338	+	2.A.1.8.1
MGYG000002518_00669	hypothetical protein	TF	453112	454014	+	Trans_reg_C
MGYG000002518_00670	N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase	null	454194	455156	+	Epimerase
MGYG000002518_00671	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	TC	455331	456380	+	9.B.146.1.7
MGYG000002518_00672	hypothetical protein	TC	456450	457559	+	1.B.18.3.1
MGYG000002518_00673	Tyrosine-protein kinase wzc	TC	457569	459767	+	8.A.3.3.2
MGYG000002518_00674	hypothetical protein	TC	459772	461070	+	2.A.66.5.2
MGYG000002518_00675	hypothetical protein	null	461051	461899	+	ATPgrasp_TupA
MGYG000002518_00676	hypothetical protein	null	461906	463060	+	No domain
MGYG000002518_00677	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	463064	463969	+	GT2
MGYG000002518_00678	Glycosyltransferase Gtf1	CAZyme	463971	465026	+	GT4
MGYG000002518_00679	Putative teichuronic acid biosynthesis glycosyltransferase TuaG	CAZyme	465034	465777	+	GT2
MGYG000002518_00680	hypothetical protein	null	465780	467648	+	No domain
MGYG000002518_00681	Respiratory nitrate reductase 1 alpha chain	TC	467941	471702	+	5.A.3.1.1
MGYG000002518_00682	Respiratory nitrate reductase 1 beta chain	TC	471699	473243	+	5.A.3.1.1
MGYG000002518_00683	Nitrate reductase molybdenum cofactor assembly chaperone NarJ	null	473240	473962	+	Nitrate_red_del
MGYG000002518_00684	Respiratory nitrate reductase 1 gamma chain	TC	473965	474642	+	5.A.3.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature