logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000002521_5|CGC64

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002521_05397
Autoinducer 2 import system permease protein LsrD
TC 4823652 4824722 - 3.A.1.2.11
MGYG000002521_05398
Ribose import ATP-binding protein RbsA
TC 4824740 4826260 - 3.A.1.2.1
MGYG000002521_05399
DNA-binding transcriptional repressor YiaJ
TF 4826483 4827298 + none
MGYG000002521_05400
Iron-sulfur protein
TC 4827422 4827895 + 3.D.1.9.2
MGYG000002521_05401
Valine--pyruvate aminotransferase
STP 4827962 4829215 - Aminotran_1_2
MGYG000002521_05402
Periplasmic alpha-amylase
CAZyme 4830258 4832288 - GH13_19| CBM26| GH13| CBM25
MGYG000002521_05403
hypothetical protein
CAZyme 4832606 4833433 + GH73
MGYG000002521_05404
Xylose operon regulatory protein
TF 4833485 4834663 - HTH_AraC+HTH_AraC
MGYG000002521_05405
Xylose transport system permease protein XylH
TC 4834756 4835937 - 3.A.1.2.4
MGYG000002521_05406
Xylose import ATP-binding protein XylG
TC 4835915 4837456 - 3.A.1.2.4
MGYG000002521_05407
D-xylose-binding periplasmic protein
TC 4837540 4838532 - 3.A.1.2.4
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by dbCAN-PUL is alpha-glucan download this fig


Genomic location