dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00675
Location and strand information: 12069 - 12737 (+)
Family: 8.A.3.2.4
Protein type: TC
Protein description: Capsular polysaccharide type 8 biosynthesis protein cap8A

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00676
Location and strand information: 12753 - 13439 (+)
Family: 8.A.3.2.1
Protein type: TC
Protein description: Tyrosine-protein kinase YwqD

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00677
Location and strand information: 13442 - 14206 (+)
Family: null
Protein type: null
Protein description: Tyrosine-protein phosphatase YwqE

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00678
Location and strand information: 14226 - 15125 (+)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00679
Location and strand information: 15156 - 16037 (+)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00680
Location and strand information: 16037 - 17068 (+)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-glucose 4-epimerase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00681
Location and strand information: 17078 - 18190 (+)
Family: null
Protein type: null
Protein description: UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00682
Location and strand information: 18194 - 19318 (+)
Family: GT0
Protein type: CAZyme
Protein description: UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase
Protein isoelectric point: 5.07
Protein molecular weight: 42704.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00683
Location and strand information: 19318 - 20400 (+)
Family: GT0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.7213
Protein molecular weight: 42357.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00684
Location and strand information: 20393 - 21793 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00685
Location and strand information: 21790 - 22347 (+)
Family: null
Protein type: null
Protein description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00686
Location and strand information: 22356 - 23594 (+)
Family: 2.A.66.2.15
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00687
Location and strand information: 23632 - 24837 (+)
Family: GT4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.2892
Protein molecular weight: 46362.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00688
Location and strand information: 24848 - 25405 (+)
Family: 9.B.18.1.2
Protein type: TC
Protein description: putative sugar transferase EpsL

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00689
Location and strand information: 25405 - 26292 (+)
Family: null
Protein type: null
Protein description: GDP-L-fucose synthase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00690
Location and strand information: 26347 - 27618 (+)
Family: null
Protein type: null
Protein description: UDP-N-acetyl-D-mannosamine dehydrogenase

Gene clsuter ID: MGYG000002548_5|CGC1
Gene ID: MGYG000002548_00691
Location and strand information: 27685 - 28830 (+)
Family: GT0
Protein type: CAZyme
Protein description: UDP-N-acetylglucosamine 2-epimerase
Protein isoelectric point: 5.5863
Protein molecular weight: 43075.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002548_00675	Capsular polysaccharide type 8 biosynthesis protein cap8A	TC	12069	12737	+	8.A.3.2.4
MGYG000002548_00676	Tyrosine-protein kinase YwqD	TC	12753	13439	+	8.A.3.2.1
MGYG000002548_00677	Tyrosine-protein phosphatase YwqE	null	13442	14206	+	CpsB_CapC
MGYG000002548_00678	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	14226	15125	+	9.B.18.2.1
MGYG000002548_00679	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	15156	16037	+	9.B.18.2.1
MGYG000002548_00680	UDP-glucose 4-epimerase	TC	16037	17068	+	9.B.18.2.1
MGYG000002548_00681	UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase	null	17078	18190	+	Epimerase
MGYG000002548_00682	UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase	CAZyme	18194	19318	+	GT0
MGYG000002548_00683	hypothetical protein	CAZyme	19318	20400	+	GT0
MGYG000002548_00684	hypothetical protein	null	20393	21793	+	No domain
MGYG000002548_00685	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	null	21790	22347	+	Hexapep
MGYG000002548_00686	hypothetical protein	TC	22356	23594	+	2.A.66.2.15
MGYG000002548_00687	hypothetical protein	CAZyme	23632	24837	+	GT4
MGYG000002548_00688	putative sugar transferase EpsL	TC	24848	25405	+	9.B.18.1.2
MGYG000002548_00689	GDP-L-fucose synthase	null	25405	26292	+	Epimerase
MGYG000002548_00690	UDP-N-acetyl-D-mannosamine dehydrogenase	null	26347	27618	+	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000002548_00691	UDP-N-acetylglucosamine 2-epimerase	CAZyme	27685	28830	+	GT0
Protein ID	Protein Name	Type	Start	End	Strand	Signature