dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02317
Location and strand information: 57278 - 59005 (-)
Family: CE8|CE4|CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4414
Protein molecular weight: 64114.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02318
Location and strand information: 59012 - 60151 (-)
Family: CE19|PL10_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7425
Protein molecular weight: 42348.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02319
Location and strand information: 60166 - 61779 (-)
Family: PL10|PL10_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5038
Protein molecular weight: 61228.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02320
Location and strand information: 61967 - 62458 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02321
Location and strand information: 62581 - 64581 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02322
Location and strand information: 64599 - 66983 (-)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2501
Protein molecular weight: 91483.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02323
Location and strand information: 67004 - 70033 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.8572
Protein molecular weight: 113898.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02324
Location and strand information: 70121 - 71809 (-)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02325
Location and strand information: 71828 - 75124 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02326
Location and strand information: 75180 - 76112 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02327
Location and strand information: 76181 - 76744 (-)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02328
Location and strand information: 76818 - 78371 (-)
Family: CE8|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0938
Protein molecular weight: 56871.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02329
Location and strand information: 78405 - 80954 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02330
Location and strand information: 81060 - 83048 (-)
Family: GH33
Protein type: CAZyme
Protein description: Hercynine oxygenase
Protein isoelectric point: 6.573
Protein molecular weight: 74772.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02331
Location and strand information: 83980 - 84549 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02332
Location and strand information: 84689 - 86857 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02333
Location and strand information: 86870 - 90091 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02334
Location and strand information: 90311 - 91840 (-)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4517
Protein molecular weight: 55525.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02335
Location and strand information: 91858 - 93483 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02336
Location and strand information: 93510 - 95444 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02337
Location and strand information: 95466 - 98714 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02338
Location and strand information: 98898 - 99848 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.6203
Protein molecular weight: 35972.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02339
Location and strand information: 99864 - 101093 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.0131
Protein molecular weight: 46711.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02340
Location and strand information: 101384 - 102781 (+)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02341
Location and strand information: 102813 - 103736 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02342
Location and strand information: 104127 - 105602 (+)
Family: 2.A.1.14.1
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02343
Location and strand information: 105700 - 107220 (-)
Family: null
Protein type: null
Protein description: Beta-barrel assembly-enhancing protease

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02344
Location and strand information: 107305 - 110631 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02345
Location and strand information: 110667 - 111392 (-)
Family: 2.A.115.2.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02346
Location and strand information: 111448 - 112908 (-)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7194
Protein molecular weight: 55139.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_12|CGC1
Gene ID: MGYG000002560_02347
Location and strand information: 112976 - 113980 (-)
Family: GH43|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8814
Protein molecular weight: 38215.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002560_02317	CE8_e6\|CE4_e36\|CE12_e9
MGYG000002560_02318
MGYG000002560_02319	PL10_e15\|4.2.2.2	pectin
MGYG000002560_02322	GH31_e16
MGYG000002560_02323	GH2_e58
MGYG000002560_02328	CE8_e16
MGYG000002560_02330	GH33_e38
MGYG000002560_02334	PL1_e38
MGYG000002560_02338	CE8_e34
MGYG000002560_02339	GH105_e8\|3.2.1.-	pectin
MGYG000002560_02346	GH140_e1\|3.2.1.-	pectin
MGYG000002560_02347	GH43_e130\|3.2.1.55	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_02317	hypothetical protein	CAZyme	57278	59005	-	CE8\| CE4\| CE12
MGYG000002560_02318	hypothetical protein	CAZyme	59012	60151	-	CE19\| PL10_1
MGYG000002560_02319	hypothetical protein	CAZyme	60166	61779	-	PL10\| PL10_2
MGYG000002560_02320	hypothetical protein	null	61967	62458	+	Cupin_2
MGYG000002560_02321	hypothetical protein	null	62581	64581	-	AXE1
MGYG000002560_02322	hypothetical protein	CAZyme	64599	66983	-	GH31
MGYG000002560_02323	Beta-galactosidase	CAZyme	67004	70033	-	GH2
MGYG000002560_02324	hypothetical protein	TC	70121	71809	-	8.A.46.1.6
MGYG000002560_02325	TonB-dependent receptor SusC	TC	71828	75124	-	1.B.14.6.1
MGYG000002560_02326	hypothetical protein	STP	75180	76112	-	FecR
MGYG000002560_02327	hypothetical protein	TF	76181	76744	-	GerE
MGYG000002560_02328	hypothetical protein	CAZyme	76818	78371	-	CE8\| CE0
MGYG000002560_02329	hypothetical protein	null	78405	80954	-	No domain
MGYG000002560_02330	Hercynine oxygenase	CAZyme	81060	83048	-	GH33
MGYG000002560_02331	hypothetical protein	null	83980	84549	-	No domain
MGYG000002560_02332	hypothetical protein	null	84689	86857	-	SusD-like_3\| SusD_RagB
MGYG000002560_02333	hypothetical protein	TC	86870	90091	-	1.B.14.6.1
MGYG000002560_02334	hypothetical protein	CAZyme	90311	91840	-	PL1_2\| PL1
MGYG000002560_02335	hypothetical protein	null	91858	93483	-	DUF5123
MGYG000002560_02336	hypothetical protein	null	93510	95444	-	SusD-like_3\| SusD_RagB
MGYG000002560_02337	hypothetical protein	TC	95466	98714	-	1.B.14.6.1
MGYG000002560_02338	Pectinesterase A	CAZyme	98898	99848	-	CE8
MGYG000002560_02339	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	99864	101093	-	GH105
MGYG000002560_02340	PTS system galactitol-specific EIIC component	TC	101384	102781	+	4.A.5.1.4
MGYG000002560_02341	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	102813	103736	+	KduI
MGYG000002560_02342	Hexuronate transporter	TC	104127	105602	+	2.A.1.14.1
MGYG000002560_02343	Beta-barrel assembly-enhancing protease	null	105700	107220	-	Peptidase_M48
MGYG000002560_02344	hypothetical protein	null	107305	110631	-	AAA_19\| AAA_12
MGYG000002560_02345	hypothetical protein	TC	110667	111392	-	2.A.115.2.8
MGYG000002560_02346	hypothetical protein	CAZyme	111448	112908	-	GH140
MGYG000002560_02347	hypothetical protein	CAZyme	112976	113980	-	GH43\| GH43_18
Protein ID	Protein Name	Type	Start	End	Strand	Signature