dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01392
Location and strand information: 165960 - 168482 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3739
Protein molecular weight: 95465.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01393
Location and strand information: 168487 - 171339 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.329
Protein molecular weight: 106404.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01394
Location and strand information: 171747 - 173579 (+)
Family: PL11
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.2578
Protein molecular weight: 68179.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01395
Location and strand information: 173598 - 175124 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1744
Protein molecular weight: 56477.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01396
Location and strand information: 175231 - 175857 (+)
Family: GerE
Protein type: TF
Protein description: ECF RNA polymerase sigma factor SigL

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01397
Location and strand information: 175926 - 176936 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01398
Location and strand information: 176971 - 180399 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01399
Location and strand information: 180411 - 181943 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002561_7|CGC3
Gene ID: MGYG000002561_01400
Location and strand information: 181969 - 185163 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5093
Protein molecular weight: 120163.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002561_01392	hypothetical protein	CAZyme	165960	168482	+	GH105
MGYG000002561_01393	hypothetical protein	CAZyme	168487	171339	+	GH106
MGYG000002561_01394	Rhamnogalacturonan endolyase YesW	CAZyme	171747	173579	+	PL11
MGYG000002561_01395	hypothetical protein	CAZyme	173598	175124	+	GH28
MGYG000002561_01396	ECF RNA polymerase sigma factor SigL	TF	175231	175857	+	GerE
MGYG000002561_01397	hypothetical protein	STP	175926	176936	+	FecR
MGYG000002561_01398	TonB-dependent receptor SusC	TC	176971	180399	+	1.B.14.6.1
MGYG000002561_01399	SusD-like protein	null	180411	181943	+	SusD-like_3\| SusD_RagB
MGYG000002561_01400	hypothetical protein	CAZyme	181969	185163	+	GH106
Protein ID	Protein Name	Type	Start	End	Strand	Signature