dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01463
Location and strand information: 67112 - 67984 (+)
Family: GH16_3|GH16
Protein type: CAZyme
Protein description: Beta-glucanase
Protein isoelectric point: 7.0742
Protein molecular weight: 33281.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01464
Location and strand information: 68243 - 69499 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9205
Protein molecular weight: 47788.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01465
Location and strand information: 69540 - 70823 (+)
Family: GH145|PL42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6456
Protein molecular weight: 48664.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01466
Location and strand information: 70849 - 71976 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.6843
Protein molecular weight: 43188.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01467
Location and strand information: 72087 - 74027 (+)
Family: GH43_19|GH43_34|3.2.1.55|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0444
Protein molecular weight: 73118.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01468
Location and strand information: 74061 - 76007 (+)
Family: GH43_19|GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 5.9386
Protein molecular weight: 72590.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01469
Location and strand information: 76026 - 78542 (+)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5665
Protein molecular weight: 93314.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01470
Location and strand information: 78529 - 80571 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.7068
Protein molecular weight: 75847.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01471
Location and strand information: 80592 - 82526 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 6.1157
Protein molecular weight: 72578.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01472
Location and strand information: 82633 - 85728 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.1704
Protein molecular weight: 117313.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01473
Location and strand information: 85793 - 89851 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01474
Location and strand information: 90234 - 93578 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01475
Location and strand information: 93588 - 95636 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01476
Location and strand information: 95794 - 97050 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01477
Location and strand information: 97579 - 98589 (+)
Family: GH43_17|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.5392
Protein molecular weight: 38256
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01478
Location and strand information: 98666 - 102793 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01479
Location and strand information: 102995 - 106267 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01480
Location and strand information: 106290 - 108347 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01481
Location and strand information: 108447 - 109748 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01482
Location and strand information: 109974 - 111125 (+)
Family: GH43_24|GH16|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.743
Protein molecular weight: 43244.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002561_8|CGC1
Gene ID: MGYG000002561_01483
Location and strand information: 111200 - 113626 (-)
Family: GH35|CBM32|GH43_24
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5308
Protein molecular weight: 92225.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002561_01463	GH16_e47
MGYG000002561_01464
MGYG000002561_01465	GH145_e0\|3.2.1.-
MGYG000002561_01466	GH105_e2\|3.2.1.-	pectin
MGYG000002561_01467	GH43_e38\|3.2.1.55	xylan
MGYG000002561_01468	GH97_e10\|3.2.1.88\|3.2.1.22	alpha-glucan
MGYG000002561_01469	GH51_e23\|3.2.1.55	arabinan
MGYG000002561_01470	GH127_e7
MGYG000002561_01471	GH51_e23\|3.2.1.55	arabinan
MGYG000002561_01472	GH2_e4\|3.2.1.23	beta-galactan
MGYG000002561_01477	GH43_e181
MGYG000002561_01482	GH43_e135\|GH16_e47
MGYG000002561_01483	GH35_e29\|CBM32_e73

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002561_01463	Beta-glucanase	CAZyme	67112	67984	+	GH16_3\| GH16
MGYG000002561_01464	hypothetical protein	CAZyme	68243	69499	+	GH154
MGYG000002561_01465	hypothetical protein	CAZyme	69540	70823	+	GH145\| PL42
MGYG000002561_01466	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	70849	71976	+	GH105
MGYG000002561_01467	hypothetical protein	CAZyme	72087	74027	+	GH43_19\| GH43_34\| 3.2.1.55\| GH43
MGYG000002561_01468	Retaining alpha-galactosidase	CAZyme	74061	76007	+	GH43_19\| GH97
MGYG000002561_01469	hypothetical protein	CAZyme	76026	78542	+	GH51
MGYG000002561_01470	Non-reducing end beta-L-arabinofuranosidase	CAZyme	78529	80571	+	GH127
MGYG000002561_01471	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	80592	82526	+	GH51
MGYG000002561_01472	Beta-galactosidase	CAZyme	82633	85728	+	GH2
MGYG000002561_01473	Sensor histidine kinase RcsC	TF	85793	89851	-	HTH_AraC
MGYG000002561_01474	hypothetical protein	TC	90234	93578	+	1.B.14.6.1
MGYG000002561_01475	hypothetical protein	TC	93588	95636	+	8.A.46.1.1
MGYG000002561_01476	hypothetical protein	null	95794	97050	+	AAA-ATPase_like
MGYG000002561_01477	hypothetical protein	CAZyme	97579	98589	+	GH43_17\| GH43
MGYG000002561_01478	Sensor histidine kinase RcsC	TF	98666	102793	+	HTH_AraC
MGYG000002561_01479	TonB-dependent receptor SusC	TC	102995	106267	+	1.B.14.6.1
MGYG000002561_01480	hypothetical protein	null	106290	108347	+	SusD-like_3\| SusD_RagB
MGYG000002561_01481	hypothetical protein	null	108447	109748	+	Peptidase_M57
MGYG000002561_01482	hypothetical protein	CAZyme	109974	111125	+	GH43_24\| GH16\| GH43
MGYG000002561_01483	hypothetical protein	CAZyme	111200	113626	-	GH35\| CBM32\| GH43_24
Protein ID	Protein Name	Type	Start	End	Strand	Signature