dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00345
Location and strand information: 22322 - 24652 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1628
Protein molecular weight: 87656.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00346
Location and strand information: 24781 - 25908 (-)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00347
Location and strand information: 25932 - 28220 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.421
Protein molecular weight: 86300.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00348
Location and strand information: 28217 - 30697 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00349
Location and strand information: 30747 - 32726 (-)
Family: GH76|GH43_3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8495
Protein molecular weight: 75360.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00350
Location and strand information: 32808 - 33515 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00351
Location and strand information: 33535 - 35403 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00352
Location and strand information: 35411 - 38623 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00353
Location and strand information: 38978 - 42589 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8573
Protein molecular weight: 134016.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00354
Location and strand information: 42908 - 44722 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2064
Protein molecular weight: 68548.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00355
Location and strand information: 44822 - 45913 (-)
Family: GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.108
Protein molecular weight: 41277.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00356
Location and strand information: 46177 - 48234 (+)
Family: GH127|CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9628
Protein molecular weight: 77637.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00357
Location and strand information: 48255 - 50039 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.5973
Protein molecular weight: 68100.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00358
Location and strand information: 50052 - 51218 (+)
Family: GH76
Protein type: CAZyme
Protein description: Cellobiose 2-epimerase
Protein isoelectric point: 8.5931
Protein molecular weight: 45301.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00359
Location and strand information: 51386 - 55381 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00360
Location and strand information: 55701 - 56501 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00361
Location and strand information: 56647 - 58023 (-)
Family: 2.A.6.2.20
Protein type: TC
Protein description: Outer membrane protein OprM

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00362
Location and strand information: 58042 - 61152 (-)
Family: 2.A.6.2.16
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000002585_4|CGC2
Gene ID: MGYG000002585_00363
Location and strand information: 61157 - 62464 (-)
Family: 2.A.6.2.45
Protein type: TC
Protein description: Multidrug resistance protein MdtA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002585_00345	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000002585_00347	GH92_e8\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000002585_00349	GH76_e2
MGYG000002585_00353	GH38_e31\|3.2.1.113\|3.2.1.-	hostglycan\|alpha-mannan
MGYG000002585_00354	GH2_e61
MGYG000002585_00355	GH43_e139
MGYG000002585_00356	CBM13_e82
MGYG000002585_00357	GH2_e111
MGYG000002585_00358	GH76_e1\|3.2.1.101	alpha-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002585_00345	hypothetical protein	CAZyme	22322	24652	-	GH92
MGYG000002585_00346	Aldose 1-epimerase	null	24781	25908	-	Aldose_epim
MGYG000002585_00347	hypothetical protein	CAZyme	25932	28220	-	GH92
MGYG000002585_00348	hypothetical protein	null	28217	30697	-	DUF4964\| DUF5127\| DUF4965\| DUF1793
MGYG000002585_00349	hypothetical protein	CAZyme	30747	32726	-	GH76\| GH43_3
MGYG000002585_00350	hypothetical protein	null	32808	33515	-	DUF3823\| DUF3823_C
MGYG000002585_00351	hypothetical protein	null	33535	35403	-	SusD-like_3\| SusD_RagB
MGYG000002585_00352	TonB-dependent receptor SusC	TC	35411	38623	-	1.B.14.6.1
MGYG000002585_00353	hypothetical protein	CAZyme	38978	42589	+	GH38
MGYG000002585_00354	Beta-galactosidase	CAZyme	42908	44722	-	GH2
MGYG000002585_00355	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	44822	45913	-	GH43\| GH43_26
MGYG000002585_00356	hypothetical protein	CAZyme	46177	48234	+	GH127\| CBM13
MGYG000002585_00357	Beta-galactosidase	CAZyme	48255	50039	+	GH2
MGYG000002585_00358	Cellobiose 2-epimerase	CAZyme	50052	51218	+	GH76
MGYG000002585_00359	Sensor histidine kinase RcsC	TF	51386	55381	-	HTH_AraC+HTH_AraC
MGYG000002585_00360	hypothetical protein	null	55701	56501	+	HU-DNA_bdg\| DUF4469
MGYG000002585_00361	Outer membrane protein OprM	TC	56647	58023	-	2.A.6.2.20
MGYG000002585_00362	Efflux pump membrane transporter BepE	TC	58042	61152	-	2.A.6.2.16
MGYG000002585_00363	Multidrug resistance protein MdtA	TC	61157	62464	-	2.A.6.2.45
Protein ID	Protein Name	Type	Start	End	Strand	Signature