dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00188
Location and strand information: 228750 - 229997 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 4.1407
Protein molecular weight: 43432.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00189
Location and strand information: 230000 - 231070 (-)
Family: null
Protein type: null
Protein description: Transcriptional regulator LytR

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00190
Location and strand information: 231109 - 231834 (-)
Family: 8.A.3.2.2
Protein type: TC
Protein description: Tyrosine-protein kinase CpsD

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00191
Location and strand information: 231834 - 232616 (-)
Family: 8.A.3.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00192
Location and strand information: 232860 - 234929 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00193
Location and strand information: 235073 - 236134 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 7.1443
Protein molecular weight: 41361.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00194
Location and strand information: 236168 - 237295 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7746
Protein molecular weight: 43209.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00195
Location and strand information: 237356 - 238363 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8348
Protein molecular weight: 39045.56
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002670_1|CGC5
Gene ID: MGYG000002670_00196
Location and strand information: 238399 - 238665 (-)
Family: 8.A.8.1.6
Protein type: TC
Protein description: HPr-like protein Crh

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002670_00188	Beta-hexosaminidase	CAZyme	228750	229997	-	GH3
MGYG000002670_00189	Transcriptional regulator LytR	null	230000	231070	-	LytR_cpsA_psr
MGYG000002670_00190	Tyrosine-protein kinase CpsD	TC	231109	231834	-	8.A.3.2.2
MGYG000002670_00191	hypothetical protein	TC	231834	232616	-	8.A.3.2.3
MGYG000002670_00192	hypothetical protein	null	232860	234929	-	PG_binding_4\| YkuD\| Big_2
MGYG000002670_00193	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	235073	236134	-	GT2
MGYG000002670_00194	hypothetical protein	CAZyme	236168	237295	-	GT2
MGYG000002670_00195	hypothetical protein	CAZyme	237356	238363	-	GT2
MGYG000002670_00196	HPr-like protein Crh	TC	238399	238665	-	8.A.8.1.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature