dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00700
Location and strand information: 2250 - 4262 (+)
Family: GH0|3.2.1.25|GH164
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6694
Protein molecular weight: 76242.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00701
Location and strand information: 4436 - 5800 (-)
Family: 2.A.6.2.20
Protein type: TC
Protein description: Outer membrane protein OprM

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00702
Location and strand information: 6050 - 9244 (-)
Family: 2.A.6.2.22
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00703
Location and strand information: 9403 - 10518 (-)
Family: 2.A.6.2.44
Protein type: TC
Protein description: Efflux pump periplasmic linker BepF

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00704
Location and strand information: 10697 - 11533 (+)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00705
Location and strand information: 11638 - 13971 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8667
Protein molecular weight: 86815.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00706
Location and strand information: 14145 - 14636 (+)
Family: GerE
Protein type: TF
Protein description: RNA polymerase sigma factor SigV

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00707
Location and strand information: 14649 - 15254 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_36|CGC1
Gene ID: MGYG000002717_00708
Location and strand information: 15235 - 16716 (-)
Family: 2.A.50.2.1
Protein type: TC
Protein description: Peptidoglycan O-acetyltransferase

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002717_00700	hypothetical protein	CAZyme	2250	4262	+	GH0\| 3.2.1.25\| GH164
MGYG000002717_00701	Outer membrane protein OprM	TC	4436	5800	-	2.A.6.2.20
MGYG000002717_00702	Efflux pump membrane transporter BepE	TC	6050	9244	-	2.A.6.2.22
MGYG000002717_00703	Efflux pump periplasmic linker BepF	TC	9403	10518	-	2.A.6.2.44
MGYG000002717_00704	hypothetical protein	TF	10697	11533	+	HTH_AraC
MGYG000002717_00705	hypothetical protein	CAZyme	11638	13971	+	GH20
MGYG000002717_00706	RNA polymerase sigma factor SigV	TF	14145	14636	+	GerE
MGYG000002717_00707	hypothetical protein	null	14649	15254	+	No domain
MGYG000002717_00708	Peptidoglycan O-acetyltransferase	TC	15235	16716	-	2.A.50.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature