dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02190
Location and strand information: 1836 - 4637 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.891
Protein molecular weight: 103559.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02191
Location and strand information: 4644 - 6506 (-)
Family: CBM2|PL11|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan exolyase YesX
Protein isoelectric point: 4.7856
Protein molecular weight: 69186.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02192
Location and strand information: 6527 - 8995 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.8981
Protein molecular weight: 92849.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02193
Location and strand information: 9111 - 11948 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02194
Location and strand information: 12178 - 15336 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02195
Location and strand information: 15342 - 17402 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02196
Location and strand information: 17438 - 20257 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02197
Location and strand information: 20279 - 22042 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02198
Location and strand information: 22137 - 25076 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.7333
Protein molecular weight: 109936.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02199
Location and strand information: 25171 - 27105 (+)
Family: GH43_19|GH43|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.922
Protein molecular weight: 72662.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02200
Location and strand information: 27279 - 27875 (+)
Family: GerE
Protein type: TF
Protein description: RNA polymerase sigma factor YlaC

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02201
Location and strand information: 27899 - 28903 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02202
Location and strand information: 29098 - 32451 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02203
Location and strand information: 32470 - 34416 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02204
Location and strand information: 34453 - 34920 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002721_26|CGC1
Gene ID: MGYG000002721_02205
Location and strand information: 35492 - 38152 (+)
Family: 3.A.3.2.17
Protein type: TC
Protein description: Calcium-transporting ATPase 1

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002721_02190	hypothetical protein	CAZyme	1836	4637	-	CE12
MGYG000002721_02191	Rhamnogalacturonan exolyase YesX	CAZyme	4644	6506	-	CBM2\| PL11\| PL11_1
MGYG000002721_02192	Beta-galactosidase BoGH2A	CAZyme	6527	8995	-	GH2
MGYG000002721_02193	HTH-type transcriptional activator RhaR	TF	9111	11948	-	HTH_AraC+HTH_AraC
MGYG000002721_02194	TonB-dependent receptor SusC	TC	12178	15336	+	1.B.14.6.1
MGYG000002721_02195	hypothetical protein	null	15342	17402	+	SusD-like_3\| SusD_RagB
MGYG000002721_02196	hypothetical protein	TC	17438	20257	+	1.B.14.6.1
MGYG000002721_02197	hypothetical protein	null	20279	22042	+	SusD-like_3\| SusD_RagB
MGYG000002721_02198	Beta-galactosidase	CAZyme	22137	25076	+	GH2
MGYG000002721_02199	hypothetical protein	CAZyme	25171	27105	+	GH43_19\| GH43\| GH43_34
MGYG000002721_02200	RNA polymerase sigma factor YlaC	TF	27279	27875	+	GerE
MGYG000002721_02201	hypothetical protein	STP	27899	28903	+	FecR
MGYG000002721_02202	TonB-dependent receptor SusC	TC	29098	32451	+	1.B.14.6.1
MGYG000002721_02203	hypothetical protein	null	32470	34416	+	SusD-like_3\| SusD_RagB
MGYG000002721_02204	hypothetical protein	null	34453	34920	+	No domain
MGYG000002721_02205	Calcium-transporting ATPase 1	TC	35492	38152	+	3.A.3.2.17
Protein ID	Protein Name	Type	Start	End	Strand	Signature