dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02383
Location and strand information: 5986 - 7065 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptF

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02384
Location and strand information: 7065 - 8147 (+)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system permease protein LptG

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02385
Location and strand information: 8283 - 10616 (+)
Family: PAS+HisKA+HATPase_c+Response_reg
Protein type: STP
Protein description: Aerobic respiration control sensor protein ArcB

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02386
Location and strand information: 10849 - 11502 (+)
Family: null
Protein type: null
Protein description: Glyoxalase ElbB

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02387
Location and strand information: 11499 - 12224 (+)
Family: GT51
Protein type: CAZyme
Protein description: Biosynthetic peptidoglycan transglycosylase
Protein isoelectric point: 10.4923
Protein molecular weight: 26977.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02388
Location and strand information: 12263 - 12535 (-)
Family: 8.A.8.1.5
Protein type: TC
Protein description: Phosphocarrier protein NPr

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02389
Location and strand information: 12532 - 13386 (-)
Family: null
Protein type: null
Protein description: RNase adapter protein RapZ

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02390
Location and strand information: 13432 - 13923 (-)
Family: 4.A.2.1.4
Protein type: TC
Protein description: Nitrogen regulatory protein

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02391
Location and strand information: 14006 - 14293 (-)
Family: null
Protein type: null
Protein description: Ribosome hibernation promoting factor

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02392
Location and strand information: 14316 - 15749 (-)
Family: null
Protein type: null
Protein description: RNA polymerase sigma-54 factor

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02393
Location and strand information: 15797 - 16522 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02394
Location and strand information: 16529 - 17083 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptA

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02395
Location and strand information: 17052 - 17627 (-)
Family: 1.B.42.1.2
Protein type: TC
Protein description: Lipopolysaccharide export system protein LptC

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02396
Location and strand information: 17624 - 18190 (-)
Family: null
Protein type: null
Protein description: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02397
Location and strand information: 18205 - 19191 (-)
Family: SIS+CBS+CBS
Protein type: STP
Protein description: Arabinose 5-phosphate isomerase KdsD

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02398
Location and strand information: 19205 - 20182 (-)
Family: 2.A.19.5.1
Protein type: TC
Protein description: Inner membrane protein YrbG

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02399
Location and strand information: 20410 - 21222 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid import ATP-binding protein MlaF

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02400
Location and strand information: 21230 - 22012 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter permease protein MlaE

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02401
Location and strand information: 22017 - 22565 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaD

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02402
Location and strand information: 22583 - 23218 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid-binding protein MlaC

Gene clsuter ID: MGYG000002823_45|CGC1
Gene ID: MGYG000002823_02403
Location and strand information: 23218 - 23511 (+)
Family: 3.A.1.27.3
Protein type: TC
Protein description: putative phospholipid ABC transporter-binding protein MlaB

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CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002823_02383	Lipopolysaccharide export system permease protein LptF	TC	5986	7065	+	1.B.42.1.2
MGYG000002823_02384	Lipopolysaccharide export system permease protein LptG	TC	7065	8147	+	1.B.42.1.2
MGYG000002823_02385	Aerobic respiration control sensor protein ArcB	STP	8283	10616	+	PAS\| HisKA\| HATPase_c\| Response_reg
MGYG000002823_02386	Glyoxalase ElbB	null	10849	11502	+	No domain
MGYG000002823_02387	Biosynthetic peptidoglycan transglycosylase	CAZyme	11499	12224	+	GT51
MGYG000002823_02388	Phosphocarrier protein NPr	TC	12263	12535	-	8.A.8.1.5
MGYG000002823_02389	RNase adapter protein RapZ	null	12532	13386	-	ATP_bind_2
MGYG000002823_02390	Nitrogen regulatory protein	TC	13432	13923	-	4.A.2.1.4
MGYG000002823_02391	Ribosome hibernation promoting factor	null	14006	14293	-	Ribosomal_S30AE
MGYG000002823_02392	RNA polymerase sigma-54 factor	null	14316	15749	-	Sigma54_AID\| Sigma54_CBD\| Sigma54_DBD
MGYG000002823_02393	Lipopolysaccharide export system ATP-binding protein LptB	TC	15797	16522	-	1.B.42.1.2
MGYG000002823_02394	Lipopolysaccharide export system protein LptA	TC	16529	17083	-	1.B.42.1.2
MGYG000002823_02395	Lipopolysaccharide export system protein LptC	TC	17052	17627	-	1.B.42.1.2
MGYG000002823_02396	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC	null	17624	18190	-	Hydrolase_3
MGYG000002823_02397	Arabinose 5-phosphate isomerase KdsD	STP	18205	19191	-	SIS\| CBS\| CBS
MGYG000002823_02398	Inner membrane protein YrbG	TC	19205	20182	-	2.A.19.5.1
MGYG000002823_02399	putative phospholipid import ATP-binding protein MlaF	TC	20410	21222	+	3.A.1.27.3
MGYG000002823_02400	putative phospholipid ABC transporter permease protein MlaE	TC	21230	22012	+	3.A.1.27.3
MGYG000002823_02401	putative phospholipid ABC transporter-binding protein MlaD	TC	22017	22565	+	3.A.1.27.3
MGYG000002823_02402	putative phospholipid-binding protein MlaC	TC	22583	23218	+	3.A.1.27.3
MGYG000002823_02403	putative phospholipid ABC transporter-binding protein MlaB	TC	23218	23511	+	3.A.1.27.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature