dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00310
Location and strand information: 74053 - 75018 (-)
Family: GH43|GH43_1
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 4.8357
Protein molecular weight: 36536.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00311
Location and strand information: 75057 - 76175 (-)
Family: GH10
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 6.691
Protein molecular weight: 42690.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00312
Location and strand information: 76185 - 77612 (-)
Family: 2.A.2.3.2
Protein type: TC
Protein description: Glucuronide carrier protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00313
Location and strand information: 77943 - 80519 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7749
Protein molecular weight: 96955.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00314
Location and strand information: 80781 - 84737 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00315
Location and strand information: 84784 - 86790 (+)
Family: GH67
Protein type: CAZyme
Protein description: Extracellular xylan exo-alpha-(1->2)-glucuronosidase
Protein isoelectric point: 8.2542
Protein molecular weight: 74187.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00316
Location and strand information: 86809 - 88560 (+)
Family: GH35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5389
Protein molecular weight: 63273.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00317
Location and strand information: 89445 - 92612 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00318
Location and strand information: 92666 - 94378 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00319
Location and strand information: 94424 - 95833 (+)
Family: null
Protein type: null
Protein description: IPT/TIG domain-containing protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00320
Location and strand information: 95859 - 97745 (+)
Family: GH10|CBM22
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0772
Protein molecular weight: 70215.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00321
Location and strand information: 98021 - 98887 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00322
Location and strand information: 98884 - 99549 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00323
Location and strand information: 99595 - 101667 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.4363
Protein molecular weight: 76956.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00324
Location and strand information: 101646 - 103406 (+)
Family: GH141
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.664
Protein molecular weight: 65262.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00325
Location and strand information: 103645 - 105018 (+)
Family: 2.A.1.1.74
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00326
Location and strand information: 105002 - 107089 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7983
Protein molecular weight: 79473.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00327
Location and strand information: 107086 - 109728 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.058
Protein molecular weight: 99655.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00328
Location and strand information: 109740 - 113783 (+)
Family: GH137|GH2|CBM57
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.9476
Protein molecular weight: 154168.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00329
Location and strand information: 113998 - 117096 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.3838
Protein molecular weight: 117517.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00330
Location and strand information: 117192 - 120005 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.5471
Protein molecular weight: 105420.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00331
Location and strand information: 120047 - 123157 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3935
Protein molecular weight: 116648.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00332
Location and strand information: 123206 - 124609 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00333
Location and strand information: 125035 - 127344 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4305
Protein molecular weight: 86820.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00334
Location and strand information: 127392 - 130151 (+)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5323
Protein molecular weight: 102485.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00335
Location and strand information: 130681 - 131904 (+)
Family: null
Protein type: null
Protein description: Peptidase T

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00336
Location and strand information: 132081 - 134330 (+)
Family: 2.A.37.5.2
Protein type: TC
Protein description: Glutathione-regulated potassium-efflux system protein KefB

Gene clsuter ID: MGYG000002877_3|CGC2
Gene ID: MGYG000002877_00337
Location and strand information: 134496 - 137333 (-)
Family: 1.B.42.1.8
Protein type: TC
Protein description: LPS-assembly protein LptD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002877_00310	GH43_e85\|3.2.1.55\|3.2.1.37	xylan
MGYG000002877_00311	GH10_e50\|3.2.1.-	xylan
MGYG000002877_00313	GH115_e2\|3.2.1.131	xylan
MGYG000002877_00315	GH67_e0\|3.2.1.139\|3.2.1.131\|3.2.1.-	xylan
MGYG000002877_00316	GH35_e24
MGYG000002877_00320
MGYG000002877_00323	GH127_e2\|3.2.1.-	carrageenan
MGYG000002877_00324	GH141_e0\|3.2.1.51	pectin
MGYG000002877_00326	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000002877_00327	GH138_e0\|3.2.1.-
MGYG000002877_00328	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000002877_00329	GH2_e119
MGYG000002877_00330	GH2_e77\|3.2.1.-	pectin
MGYG000002877_00331	GH106_e13\|3.2.1.40	pectin
MGYG000002877_00333	GH139_e0\|3.2.1.-	pectin
MGYG000002877_00334	GH78_e41\|3.2.1.40	alpha-rhamnoside

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002877_00310	Xylosidase/arabinosidase	CAZyme	74053	75018	-	GH43\| GH43_1
MGYG000002877_00311	Endo-1,4-beta-xylanase A	CAZyme	75057	76175	-	GH10
MGYG000002877_00312	Glucuronide carrier protein	TC	76185	77612	-	2.A.2.3.2
MGYG000002877_00313	hypothetical protein	CAZyme	77943	80519	+	GH115
MGYG000002877_00314	Sensor histidine kinase RcsC	TF	80781	84737	+	HTH_AraC+HTH_AraC
MGYG000002877_00315	Extracellular xylan exo-alpha-(1->2)-glucuronosidase	CAZyme	84784	86790	+	GH67
MGYG000002877_00316	hypothetical protein	CAZyme	86809	88560	+	GH35
MGYG000002877_00317	TonB-dependent receptor SusC	TC	89445	92612	+	1.B.14.6.1
MGYG000002877_00318	SusD-like protein	null	92666	94378	+	SusD-like_3\| SusD_RagB
MGYG000002877_00319	IPT/TIG domain-containing protein	null	94424	95833	+	SGBP_B_XBD
MGYG000002877_00320	hypothetical protein	CAZyme	95859	97745	+	GH10\| CBM22
MGYG000002877_00321	hypothetical protein	null	98021	98887	+	AP_endonuc_2
MGYG000002877_00322	hypothetical protein	null	98884	99549	+	DUF3826
MGYG000002877_00323	Non-reducing end beta-L-arabinofuranosidase	CAZyme	99595	101667	+	GH127
MGYG000002877_00324	hypothetical protein	CAZyme	101646	103406	+	GH141
MGYG000002877_00325	hypothetical protein	TC	103645	105018	+	2.A.1.1.74
MGYG000002877_00326	hypothetical protein	CAZyme	105002	107089	+	GH78
MGYG000002877_00327	hypothetical protein	CAZyme	107086	109728	+	GH138
MGYG000002877_00328	Beta-galactosidase	CAZyme	109740	113783	+	GH137\| GH2\| CBM57
MGYG000002877_00329	Beta-galactosidase	CAZyme	113998	117096	+	GH2
MGYG000002877_00330	Evolved beta-galactosidase subunit alpha	CAZyme	117192	120005	+	GH2
MGYG000002877_00331	hypothetical protein	CAZyme	120047	123157	+	GH106
MGYG000002877_00332	hypothetical protein	null	123206	124609	+	SASA
MGYG000002877_00333	hypothetical protein	CAZyme	125035	127344	+	GH139
MGYG000002877_00334	hypothetical protein	CAZyme	127392	130151	+	CBM67\| GH78
MGYG000002877_00335	Peptidase T	null	130681	131904	+	Peptidase_M20\| M20_dimer
MGYG000002877_00336	Glutathione-regulated potassium-efflux system protein KefB	TC	132081	134330	+	2.A.37.5.2
MGYG000002877_00337	LPS-assembly protein LptD	TC	134496	137333	-	1.B.42.1.8
Protein ID	Protein Name	Type	Start	End	Strand	Signature